Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC8:F.O3'/1 3.35 ARG232:B.NH2/1
3DR10:G.OP1/1 2.96 HIS115:B.NE2/1
3DR10:G.OP2/1 2.93 HIS182:B.NE2/1
3DR10:G.OP2/1 2.97 GLU271:B.OE2/1
3DR10:G.O3'/1 2.97 ASN273:B.ND2/1
DC11:G.OP2/1 2.54 TYR81:B.OH/1
DG12:G.OP1/1 3.18 HIS8:B.N/1
DG12:G.OP2/1 2.69 SER7:B.OG/1
DG9:H.OP1/1 3.03 ALA52:B.N/1
DG9:H.N2/1 3.11 ARG89:B.NE/1
DG9:H.N3/1 2.42 ARG89:B.NE/1
DG11:H.OP1/1 2.59 SER87:B.OG/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC11:G.O5'/1 2.95 406:B/1 2.54 ARG50:B.NE/1
DC11:G.O4'/1 3.11 406:B/1 2.54 ARG50:B.NE/1
DG12:G.OP1/1 2.69 102:G/1 2.93 PHE45:B.N/1
DG10:H.N2/1 3.17 420:B/1 2.71 HIS115:B.ND1/1
DC13:H.OP1/1 2.51 101:H/1 2.79 ASN146:B.ND2/1
DC13:H.OP1/1 2.51 101:H/1 2.53 LYS147:B.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text