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Nucleic atom dist Protein atom
DT4:O.OP2/1 3.11 SER7:K.N/1
DT4:O.OP2/1 2.96 SER7:K.OG/1
DT5:O.OP2/1 3.15 LYS14:L.NZ/1
DG6:O.N7/1 3 ARG10:K.NH2/1
DG6:O.O6/1 3.17 ARG10:K.NH1/1
DT7:O.O4/1 3.2 ARG10:K.NH2/1
DA8:O.N6/1 3.15 ARG10:L.NH1/1
DT16:O.OP2/1 2.83 SER7:J.N/1
DT16:O.OP2/1 2.52 SER7:J.OG/1
DG18:O.N7/1 2.7 ARG10:J.NH2/1
DG18:O.O6/1 2.79 ARG10:J.NH1/1
DA20:O.N7/1 3.04 GLN11:I.NE2/1
DA20:O.N6/1 3.49 ARG10:I.NH1/1
DA20:O.N6/1 3.14 GLN11:I.OE1/1
DT4:P.OP2/1 2.9 SER7:I.N/1
DT4:P.OP2/1 2.84 SER7:I.OG/1
DT5:P.OP2/1 2.73 LYS14:J.NZ/1
DG6:P.N7/1 2.96 ARG10:I.NH2/1
DG6:P.O6/1 2.93 ARG10:I.NH1/1
DA8:P.N6/1 3.41 ARG10:J.NH1/1
DT15:P.OP1/1 3.23 ASN5:L.ND2/1
DC16:P.OP2/1 2.82 SER7:L.N/1
DC16:P.OP2/1 2.7 SER7:L.OG/1
DG18:P.N7/1 2.87 ARG10:L.NH2/1
DA20:P.N7/1 3.49 GLN11:K.NE2/1
DA20:P.N6/1 3.48 ARG10:K.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG18:O.OP2/1 2.55 102:O/1 2.92 LYS14:I.N/1
DG18:O.OP2/1 2.88 108:O/1 3.15 ALA15:I.N/1
DG18:O.OP2/1 2.55 102:O/1 2.7 TYR6:J.OH/1
DT19:O.O4/1 2.8 106:O/1 2.97 GLN11:I.OE1/1
DT4:P.OP1/1 2.67 104:P/1 2.69 THR30:I.OG1/1
DT4:P.OP1/1 2.98 101:P/1 3.18 THR32:I.N/1
DG6:P.OP2/1 2.48 102:P/1 2.6 TYR6:I.OH/1
DG6:P.OP2/1 2.7 105:P/1 2.78 GLN11:J.O/1
DG6:P.OP2/1 2.48 102:P/1 3.14 LYS14:J.N/1
DG6:P.OP2/1 2.84 110:J/1 2.77 ALA15:J.N/1
DA8:P.N6/1 3.06 105:J/1 3.29 ARG10:J.NH1/1
DG18:P.OP2/1 3.11 111:K/1 2.89 ALA15:K.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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