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Nucleic atom dist Protein atom
DT5:P.OP1/1 3.19 LYS261:A.NZ/1
DG6:P.OP1/1 2.91 LEU262:A.N/1
DG6:P.OP2/1 2.89 LYS261:A.N/1
DA7:P.OP1/1 2.76 SER257:A.N/1
DA7:P.OP1/1 3.08 GLY259:A.N/1
DA7:P.O3'/1 2.76 ARG256:A.NH1/1
DG8:P.OP1/1 2.53 TYR118:A.OH/1
DG8:P.OP1/1 2.75 ARG256:A.NH1/1
DG8:P.O3'/1 2.71 SER113:A.OG/1
DC5:T.OP1/1 2.76 ASN324:A.N/1
DC5:T.OP2/1 3.01 ASN324:A.ND2/1
DT6:T.OP2/1 3.24 SER322:A.N/1
DT6:T.OP2/1 2.92 SER322:A.OG/1
DC7:T.OP2/1 2.76 GLY320:A.N/1
DC7:T.OP2/1 3.08 GLY320:A.O/1
DA8:T.OP1/1 3.11 LYS317:A.N/1
DA8:T.OP2/1 2.97 THR318:A.OG1/1
DC9:T.OP2/1 2.86 LYS317:A.NZ/1
DC11:T.OP1/1 2.99 LYS293:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:P.OP1/1 3.09 610:A/1 2.66 GLY260:A.N/1
DG6:P.OP1/1 3.09 610:A/1 3.21 GLY263:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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