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Nucleic atom dist Protein atom
DG21:J.OP2/1 3.31 SER53:D.N/1
DC23:J.OP2/1 3.04 TYR39:D.OH/1
DT31:J.OP1/1 2.84 ARG32:C.NH1/1
DG32:J.OP2/1 2.99 ARG17:C.NH2/1
DG33:J.OP2/1 3.18 ARG20:C.NH1/1
DC41:J.OP1/1 2.93 SER84:D.N/1
DC41:J.OP1/1 2.67 THR85:D.OG1/1
DA51:J.OP1/1 3.02 GLN85:A.O/1
DA51:J.OP1/1 2.93 GLN85:A.OE1/1
DA51:J.OP2/1 2.5 SER86:A.OG/1
DC52:J.OP1/1 2.94 ARG72:A.NH1/1
DC52:J.OP1/1 2.72 ARG72:A.NH2/1
DC52:J.OP1/1 2.94 PHE84:A.N/1
DC52:J.OP2/1 3.09 ARG72:A.NH2/1
DC53:J.OP1/1 3.01 LYS443:W.NZ/1
DC53:J.OP2/1 2.73 LYS443:W.NZ/1
DC55:J.OP1/1 2.71 THR509:W.N/1
DC55:J.OP1/1 3.18 THR509:W.OG1/1
DT56:J.OP1/1 2.93 SER558:W.OG/1
DT56:J.OP2/1 2.82 ASP530:W.O/1
DT57:J.OP2/1 2.87 GLY531:W.O/1
DA59:J.OP1/1 2.4 ARG267:W.NH2/1
DA59:J.OP1/1 3.13 LYS292:W.NZ/1
DA60:J.OP1/1 3.07 LYS264:W.NZ/1
DA60:J.OP2/1 3.18 LYS264:W.NZ/1
DG62:J.OP1/1 2.86 ARG36:B.NH2/1
DG62:J.OP2/1 2.86 ARG36:B.NH1/1
DC63:J.OP1/1 2.64 ARG23:B.NH2/1
DG70:J.OP1/1 2.98 ARG42:A.NH2/1
DG72:J.OP1/1 2.85 VAL117:A.N/1
DG72:J.OP1/1 2.97 THR118:A.N/1
DG72:J.OP1/1 3.14 THR118:A.OG1/1
DG82:J.OP2/1 3.21 GLY48:F.N/1
DC83:J.OP1/1 2.42 ILE46:F.N/1
DC83:J.OP1/1 2.94 ILE46:F.O/1
DG84:J.OP1/1 3.11 GLY44:E.N/1
DG84:J.OP1/1 3.04 VAL46:E.N/1
DG84:J.OP1/1 3.33 ALA47:E.N/1
DG84:J.N3/1 2.48 ARG40:E.NH2/1
DG93:J.OP1/1 3.46 LYS64:E.N/1
DG93:J.OP1/1 2.68 LYS64:E.NZ/1
DG93:J.OP2/1 3.22 LEU65:E.N/1
DT103:J.OP1/1 3.14 LYS79:F.N/1
DA105:J.O4'/1 2.93 ARG26:D.NH2/1
DA105:J.N3/1 3.3 ARG26:D.NH1/1
DT114:J.OP1/1 2.95 VAL43:G.N/1
DC124:J.OP1/1 3.28 ARG29:G.NH2/1
DC124:J.OP1/1 3.03 SER33:H.N/1
DC124:J.OP1/1 3 SER33:H.O/1
DG125:J.OP1/1 2.92 THR29:H.O/1
DG125:J.OP1/1 3.21 LYS31:H.N/1
DT133:J.OP1/1 2.96 ARG77:G.N/1
DT133:J.OP2/1 3.08 THR76:G.N/1
DA134:J.OP2/1 2.38 LYS75:G.NZ/1
DG145:J.OP1/1 2.89 ARG42:A.N/1
DG145:J.OP1/1 2.94 THR45:A.OG1/1
DA74:I.OP2/1 2.58 LYS298:W.NZ/1
DT75:I.OP1/1 2.46 LYS294:W.NZ/1
DG78:I.O3'/1 2.69 ARG77:G.NH1/1
DA79:I.OP1/1 2.78 ARG77:G.NH1/1
DA79:I.OP1/1 3.11 TYR39:H.OH/1
DA79:I.OP1/1 3.46 ILE51:H.N/1
DT88:I.OP1/1 2.52 ARG32:G.NE/1
DG90:I.OP1/1 3.04 LYS15:G.N/1
DG90:I.OP1/1 2.89 LYS15:G.O/1
DG90:I.O3'/1 2.91 ARG11:G.N/1
DA91:I.OP1/1 3.31 ARG11:G.N/1
DG98:I.OP1/1 2.82 SER84:H.N/1
DG98:I.OP1/1 2.81 SER84:H.OG/1
DC109:I.OP1/1 2.92 ARG72:E.NH1/1
DC109:I.OP1/1 2.99 ARG72:E.NH2/1
DC109:I.OP1/1 2.82 PHE84:E.N/1
DC109:I.OP2/1 2.94 ARG72:E.NH2/1
DA119:I.OP1/1 2.47 ARG63:E.NH1/1
DA119:I.OP1/1 2.61 ARG36:F.NH2/1
DA119:I.OP2/1 2.95 ARG36:F.NH1/1
DG129:I.OP1/1 2.69 VAL117:E.N/1
DG129:I.OP1/1 2.83 THR118:E.N/1
DG129:I.OP1/1 2.95 THR118:E.OG1/1
DT139:I.OP1/1 3.24 GLY48:B.N/1
DA140:I.OP1/1 2.74 ILE46:B.N/1
DA140:I.OP1/1 3.02 ILE46:B.O/1
DA140:I.OP2/1 2.96 ARG35:B.NH1/1
DC141:I.OP1/1 3.27 GLY44:A.N/1
DC141:I.OP1/1 3.15 VAL46:A.N/1
DC141:I.OP1/1 3.27 ALA47:A.N/1
DC141:I.O2/1 3.44 ARG40:A.NH2/1
DG142:I.OP1/1 3.04 TYR41:A.N/1
DG142:I.O4'/1 2.98 ARG40:A.NH1/1
DT149:I.O3'/1 2.43 ARG63:A.NH1/1
DA150:I.OP1/1 3.34 LYS64:A.N/1
DA150:I.OP2/1 3.13 LEU65:A.N/1
DG152:I.O5'/1 3.12 LYS319:W.NZ/1
DC153:I.OP2/1 3.03 LYS319:W.N/1
DG154:I.OP1/1 3.07 ASN315:W.OD1/1
DG157:I.OP2/1 2.8 ARG620:W.NH2/1
DA160:I.OP1/1 2.58 LYS79:B.N/1
DA170:I.OP1/1 2.44 ALA45:C.N/1
DC171:I.OP1/1 2.83 VAL43:C.N/1
DC171:I.OP2/1 3.21 ARG35:C.NE/1
DC171:I.OP2/1 2.39 ARG35:C.NH2/1
DG180:I.N2/1 3.13 ARG30:D.NH2/1
DA181:I.OP1/1 2.47 ARG29:C.NH2/1
DA181:I.OP1/1 3.33 SER33:D.N/1
DA181:I.OP1/1 3.12 SER33:D.O/1
DA181:I.N3/1 2.9 ARG30:D.NH1/1
DG182:I.OP1/1 2.84 THR29:D.O/1
DG182:I.OP1/1 3.26 LYS31:D.N/1
DG184:I.OP1/1 2.46 LYS24:D.NZ/1
DG190:I.OP1/1 2.58 THR76:C.N/1
DG190:I.OP1/1 2.89 ARG77:C.N/1
DG191:I.OP2/1 3.48 LYS75:C.NZ/1
DC202:I.OP1/1 3.11 ARG42:E.N/1
DT203:I.OP2/1 2.39 ARG42:E.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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