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Nucleic atom dist Protein atom
DT2:D.OP1/1 2.82 GLY66:A.N/1
DT2:D.OP1/1 3.02 ILE69:A.N/1
DT2:D.OP2/1 2.81 LYS68:A.N/1
DC3:D.OP1/1 2.68 GLY64:A.N/1
DC8:P.OP1/1 3.28 GLY107:A.N/1
DC8:P.OP1/1 2.63 ALA110:A.N/1
DC8:P.OP2/1 2.97 SER109:A.N/1
DG9:P.OP1/1 2.78 GLY105:A.N/1
DOC10:P.OP1/1 2.72 ARG254:A.NH2/1
DC6:T.O2/1 3.12 ARG283:A.NH1/1
DG7:T.OP1/1 2.8 THR292:A.OG1/1
DC8:T.OP1/1 2.84 ASN294:A.ND2/1
DG9:T.OP1/1 2.49 TYR296:A.OH/1
DC10:T.OP1/1 3.07 THR233:A.N/1
DC10:T.OP1/1 2.98 LYS234:A.N/1
DA11:T.OP1/1 3.07 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:P.OP2/1 2.79 532:A/1 2.75 THR101:A.O/1
DG7:T.N3/1 3.37 505:A/1 2.85 ARG283:A.NH1/1
DG7:T.N3/1 3.37 505:A/1 2.25 GLU295:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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