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Nucleic atom dist Protein atom
DC6:T.OP2/1 3.01 LYS280:A.NZ/1
DC6:T.O2/1 3.13 ARG283:A.NH1/1
DA7:T.OP1/1 2.62 THR292:A.OG1/1
DA8:T.OP1/1 3.02 ASN294:A.ND2/1
DG9:T.OP1/1 2.64 TYR296:A.OH/1
DG9:T.N3/1 2.95 LYS234:A.NZ/1
DC10:T.OP1/1 3 THR233:A.N/1
DC10:T.OP1/1 2.86 LYS234:A.N/1
DA11:T.OP1/1 2.98 LYS230:A.N/1
DA11:T.OP1/1 3.17 LYS230:A.O/1
DC8:P.OP1/1 3.07 GLY107:A.N/1
DC8:P.OP1/1 2.87 ALA110:A.N/1
DC8:P.OP2/1 3.04 SER109:A.N/1
DT9:P.OP1/1 2.76 GLY105:A.N/1
2DT10:P.OP1/1 2.87 ARG254:A.NH2/1
DT1:D.OP1/1 2.74 LYS68:A.NZ/1
DT2:D.OP1/1 2.87 GLY66:A.N/1
DT2:D.OP1/1 2.87 ILE69:A.N/1
DT2:D.OP2/1 3.11 LYS68:A.N/1
DC3:D.OP1/1 2.84 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:T.N4/1 3.09 135:T/1 3.23 ASN37:A.OD1/1
DC6:T.N4/1 3.09 135:T/1 3.33 ASN37:A.ND2/1
DA7:T.OP1/1 2.84 121:T/1 2.87 ARG283:A.O/1
DA7:T.OP1/1 2.84 121:T/1 2.9 ILE293:A.N/1
DA7:T.N3/1 3.04 521:A/1 2.83 ARG283:A.NH1/1
DA7:T.N3/1 3.04 521:A/1 3.25 ARG283:A.NH2/1
DA7:T.N3/1 3.04 521:A/1 2.52 GLU295:A.OE1/1
DA8:T.OP1/1 2.98 129:T/1 3.16 ARG299:A.NH2/1
DA8:T.N3/1 2.92 126:T/1 2.96 LYS234:A.NZ/1
DG9:T.O4'/1 3.06 126:T/1 2.96 LYS234:A.NZ/1
DG9:T.N2/1 3.2 113:T/1 3.2 SER229:A.OG/1
DC10:T.OP2/1 2.64 110:T/1 2.95 GLU232:A.N/1
DC10:T.OP2/1 2.77 118:T/1 3.13 THR233:A.OG1/1
DA11:T.OP1/1 3.07 623:A/1 2.83 LYS230:A.O/1
DA11:T.OP2/1 2.77 552:A/1 2.67 LYS230:A.O/1
DA11:T.O3'/1 3.1 125:T/1 2.97 HIS135:A.N/1
DT12:T.OP1/1 2.49 106:T/1 2.95 HIS134:A.N/1
DT12:T.OP1/1 2.9 125:T/1 2.97 HIS135:A.N/1
DT9:P.OP2/1 2.48 205:P/1 3.15 THR101:A.O/1
DT9:P.O2/1 2.82 540:A/1 2.62 LYS234:A.NZ/1
2DT10:P.OP1/1 2.9 599:A/1 2.78 SER104:A.OG/1
2DT10:P.OP1/1 2.69 210:P/1 2.93 ASP190:A.OD2/1
2DT10:P.OP1/1 2.9 599:A/1 2.91 ARG254:A.NE/1
2DT10:P.O4'/1 2.68 540:A/1 2.62 LYS234:A.NZ/1
DT1:D.OP2/1 2.52 204:D/1 3.1 LYS35:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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