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Nucleic atom dist Protein atom
DC6:T.OP2/1 2.54 LYS280:A.NZ/1
DA7:T.OP1/1 2.65 THR292:A.OG1/1
DA8:T.OP1/1 3 ASN294:A.ND2/1
DG9:T.OP1/1 2.61 TYR296:A.OH/1
DC10:T.OP1/1 3.05 THR233:A.N/1
DC10:T.OP1/1 2.96 LYS234:A.N/1
DA11:T.OP1/1 3.02 LYS230:A.N/1
DC8:P.OP1/1 3.13 GLY107:A.N/1
DC8:P.OP1/1 2.72 ALA110:A.N/1
DC8:P.OP2/1 3.05 SER109:A.N/1
DT9:P.OP1/1 2.73 GLY105:A.N/1
2DT10:P.OP1/1 2.78 ARG254:A.NH2/1
DT1:D.OP1/1 3.01 LYS68:A.NZ/1
DT2:D.OP1/1 2.92 GLY66:A.N/1
DT2:D.OP1/1 2.89 ILE69:A.N/1
DT2:D.OP2/1 3.3 LYS68:A.N/1
DC3:D.OP1/1 2.89 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:T.N4/1 2.82 113:T/1 3.11 ASN37:A.OD1/1
DA7:T.OP1/1 2.93 593:A/1 2.84 ARG283:A.O/1
DA7:T.OP1/1 2.93 593:A/1 2.88 ILE293:A.N/1
DA7:T.N3/1 2.99 524:A/1 2.86 ARG283:A.NH1/1
DA7:T.N3/1 2.99 524:A/1 3.27 ARG283:A.NH2/1
DA7:T.N3/1 2.99 524:A/1 2.59 GLU295:A.OE1/1
DG9:T.N2/1 3.04 502:A/1 2.05 LYS234:A.NZ/1
DG9:T.N3/1 3.35 502:A/1 2.05 LYS234:A.NZ/1
DC10:T.OP2/1 2.74 108:T/1 2.92 GLU232:A.N/1
DC10:T.OP2/1 2.94 118:T/1 3.13 THR233:A.OG1/1
DC10:T.O4'/1 2.77 502:A/1 2.05 LYS234:A.NZ/1
DA11:T.OP1/1 2.88 594:A/1 2.84 LYS230:A.O/1
DA11:T.OP2/1 2.77 110:T/1 2.91 LYS230:A.O/1
DA11:T.O3'/1 3.17 629:A/1 2.96 HIS135:A.N/1
DT12:T.OP1/1 2.62 102:T/1 2.92 HIS134:A.N/1
DT12:T.OP1/1 3.05 629:A/1 2.96 HIS135:A.N/1
DT9:P.OP2/1 2.76 108:P/1 3.43 LYS27:A.NZ/1
DT9:P.OP2/1 2.62 104:P/1 3.11 THR101:A.O/1
2DT10:P.OP1/1 2.97 586:A/1 2.82 SER104:A.OG/1
2DT10:P.OP1/1 2.97 586:A/1 2.99 ARG254:A.NE/1
DT1:D.OP1/1 2.75 537:A/1 2.92 TYR39:A.OH/1
DT1:D.OP1/1 2.75 537:A/1 2.67 LYS72:A.NZ/1
DT1:D.OP2/1 2.56 105:D/1 3.11 LYS35:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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