Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA20:I.OP1/1 3.2 SER56:H.N/1
DA20:I.OP1/1 2.99 SER56:H.OG/1
DG21:I.OP2/1 2.86 TYR42:H.OH/1
DA29:I.OP1/1 2.48 ARG33:H.NH2/1
DT31:I.OP1/1 2.46 ARG17:G.N/1
DT32:I.OP1/1 3.19 LYS15:G.N/1
DT32:I.OP1/1 3.09 LYS15:G.O/1
DT32:I.OP1/1 2.54 ARG20:G.NH2/1
DG40:I.OP1/1 3.12 SER87:H.N/1
DA41:I.OP2/1 2.47 ARG86:H.NH2/1
DG50:I.OP1/1 2.38 GLN85:E.NE2/1
DC51:I.OP1/1 3.25 ARG72:E.NH1/1
DC51:I.OP1/1 2.97 PHE84:E.N/1
DC51:I.OP2/1 2.93 ARG72:E.NH2/1
DC70:I.OP1/1 3.21 LYS44:F.NZ/1
DG71:I.OP1/1 3.46 VAL117:E.N/1
DC81:I.OP1/1 2.36 SER47:B.OG/1
DC81:I.OP2/1 2.93 GLY48:B.N/1
DC82:I.OP1/1 2.96 ILE46:B.N/1
DC82:I.OP1/1 2.89 ILE46:B.O/1
DG83:I.OP1/1 2.93 GLY44:A.N/1
DC92:I.OP2/1 3.21 LEU65:A.N/1
DG100:I.O3'/1 2.39 ARG83:A.NH2/1
DG101:I.OP1/1 2.54 LYS79:B.NZ/1
DG102:I.OP1/1 2.69 THR80:B.OG1/1
DT112:I.OP2/1 3.26 ALA45:C.N/1
DA113:I.OP1/1 2.75 VAL43:C.N/1
DC123:I.OP1/1 3.41 ARG29:C.NH2/1
DA131:I.O4'/1 3.05 ARG77:C.NH1/1
DG132:I.OP1/1 3.02 THR76:C.N/1
DG132:I.OP1/1 3.04 ARG77:C.N/1
DA133:I.OP2/1 2.46 LYS75:C.NZ/1
DA31:J.OP1/1 3.18 ARG17:C.N/1
DG32:J.OP1/1 3.1 ARG20:C.NH2/1
DA40:J.OP1/1 2.66 SER87:D.N/1
DA40:J.OP1/1 2.64 SER87:D.OG/1
DT50:J.OP1/1 2.45 GLN85:A.NE2/1
DT51:J.OP1/1 3.43 ARG72:A.NH1/1
DT51:J.OP1/1 2.73 PHE84:A.N/1
DT51:J.OP2/1 3.34 ARG72:A.NH2/1
DA62:J.OP2/1 2.33 THR30:B.OG1/1
DG66:J.N2/1 3.39 ARG40:A.NH2/1
DA71:J.OP1/1 3.19 VAL117:A.N/1
DA71:J.OP1/1 2.81 THR118:A.OG1/1
DC72:J.OP2/1 2.78 ARG116:A.NH2/1
DC81:J.OP1/1 2.7 SER47:F.OG/1
DC81:J.OP1/1 2.41 GLY48:F.N/1
DG82:J.OP1/1 3.02 ILE46:F.N/1
DG82:J.OP1/1 2.91 ILE46:F.O/1
DG82:J.OP2/1 3.32 ARG35:F.NH2/1
DT83:J.OP1/1 3.06 GLY44:E.N/1
DT83:J.OP1/1 3.3 ALA47:E.N/1
DG92:J.OP2/1 3.39 LEU65:E.N/1
DA100:J.O3'/1 2.55 ARG83:E.NH2/1
DG101:J.OP1/1 3.22 ARG83:E.NH2/1
DA102:J.OP1/1 2.57 THR80:F.OG1/1
DG112:J.OP2/1 3.18 ALA45:G.N/1
DA113:J.OP1/1 2.78 VAL43:G.N/1
DG122:J.OP1/1 2.36 TYR40:H.OH/1
DC123:J.OP1/1 3.06 ARG29:G.NH2/1
DC132:J.OP1/1 2.85 THR76:G.N/1
DC132:J.OP1/1 2.64 ARG77:G.N/1
DC144:J.OP1/1 3.13 ARG42:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text