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Nucleic atom dist Protein atom
DG9:B.OP1/1 3.18 GLY352:A.N/1
DC10:B.OP1/1 2.83 GLY348:A.N/1
DG11:B.O4'/1 3.07 ARG643:A.NH2/1
DG11:B.N3/1 3.04 ARG643:A.NH1/1
DG11:B.N3/1 3.04 ARG643:A.NH1/1
DT12:B.OP1/1 2.89 ASN594:A.ND2/1
DT12:B.OP2/1 2.99 SER588:A.OG/1
DT12:B.OP2/1 3.18 ASN590:A.ND2/1
DT12:B.O5'/1 2.96 GLN572:A.NE2/1
DC13:B.OP1/1 3.01 ARG573:A.N/1
DG1:C.OP1/1 3.31 ARG589:A.NH1/1
DG1:C.OP2/1 3.04 LYS568:A.NZ/1
DT2:C.OP1/1 2.96 LYS746:A.NZ/1
DT2:C.OP1/1 2.63 TYR749:A.OH/1
DT2:C.OP2/1 2.84 LYS744:A.NZ/1
DC3:C.OP1/1 3.01 ARG874:A.NE/1
DC3:C.OP2/1 3.04 ARG549:A.NH1/1
DC3:C.OP2/1 3.2 ARG549:A.NH2/1
DG4:C.OP1/1 3.18 GLY799:A.O/1
DG5:C.OP1/1 2.95 ASP802:A.N/1
DC7:C.OP1/1 2.56 SER303:A.OG/1
DT10:D.OP1/1 2.82 ARG738:A.NE/1
DC12:D.OP1/1 2.78 ALA455:A.N/1
DC12:D.OP1/1 3.08 SER458:A.N/1
DC12:D.OP1/1 2.79 SER458:A.OG/1
DC12:D.OP2/1 3.06 GLN457:A.N/1
DG13:D.OP1/1 2.89 GLY453:A.N/1
DG13:D.N3/1 3.11 LYS770:A.NZ/1
DA14:D.OP1/1 3.18 ARG451:A.NH2/1
DA14:D.O5'/1 2.9 LYS770:A.N/1
DC15:D.OP1/1 2.89 ARG768:A.N/1
DC15:D.OP2/1 2.91 ARG449:A.NH1/1
DA17:D.OP1/1 2.89 LYS795:A.N/1
DA17:D.OP1/1 2.49 TYR855:A.OH/1
DC18:D.OP1/1 2.69 SER850:A.OG/1
DC18:D.OP2/1 2.6 SER852:A.OG/1
DG19:D.OP1/1 2.89 GLN636:A.NE2/1
DA21:D.OP1/1 2.89 ARG643:A.N/1
DT22:D.OP1/1 2.84 LYS644:A.NZ/1
DC23:D.OP1/1 2.75 GLY416:A.N/1
DA24:D.OP1/1 2.95 THR420:A.N/1
DA24:D.OP2/1 2.77 ALA418:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:B.OP1/1 2.26 101:B/1 2.43 GLY350:A.N/1
DG9:B.OP1/1 2.26 101:B/1 3.22 VAL353:A.N/1
DG9:B.OP2/1 3.11 1471:A/1 2.89 ASP351:A.N/1
DG9:B.OP2/1 2.77 119:B/1 3.11 GLY352:A.N/1
DC10:B.OP1/1 3.19 1383:A/1 2.79 LEU347:A.N/1
DG11:B.OP1/1 2.62 102:B/1 2.8 GLY344:A.O/1
DG11:B.OP1/1 2.57 105:B/1 2.92 LEU345:A.O/1
DG11:B.OP1/1 2.39 102:B/1 2.8 GLY344:A.O/1
DG11:B.OP1/1 2.54 105:B/1 2.92 LEU345:A.O/1
DT12:B.OP1/1 0.45 1105:A/1 3.12 ASN594:A.ND2/1
DT12:B.OP1/1 2.82 122:B/1 2.85 LYS597:A.NZ/1
DT12:B.OP2/1 2.57 1105:A/1 3.12 ASN594:A.ND2/1
DT12:B.OP2/1 1.44 1105:A/1 2.25 ASN590:A.ND2/1
DT12:B.O5'/1 2.89 127:B/1 0.19 GLN572:A.NE2/1
DC13:B.OP1/1 2.84 1379:A/1 3.34 GLN572:A.NE2/1
DC13:B.OP1/1 2.84 1379:A/1 2.8 ARG573:A.O/1
DC13:B.OP1/1 2.84 1379:A/1 2.79 ARG589:A.N/1
DC13:B.O3'/1 2.67 1204:A/1 2.68 ASP570:A.OD1/1
DC13:B.O3'/1 2.67 1204:A/1 2.63 GLY571:A.O/1
DC13:B.O3'/1 3.28 1172:A/1 2.59 GLU621:A.OE2/1
DC13:B.O3'/1 2.67 1204:A/1 3.36 ARG871:A.NH2/1
DC13:B.O2/1 2.75 116:B/1 2.92 ARG871:A.NE/1
DC3:C.OP1/1 2.77 208:C/1 2.82 ASP748:A.O/1
DC3:C.OP1/1 2.77 208:C/1 3.45 ARG874:A.NE/1
DC3:C.OP1/1 2.77 208:C/1 2.88 ARG874:A.NH2/1
DC3:C.OP2/1 2.95 1157:A/1 2.55 ARG549:A.NH1/1
DG4:C.OP1/1 3.13 1386:A/1 2.93 GLY799:A.O/1
DG4:C.N2/1 3.06 229:C/1 3.04 LYS770:A.NZ/1
DG5:C.OP1/1 2.6 203:C/1 2.98 GLU803:A.N/1
DG5:C.O4'/1 2.94 229:C/1 3.04 LYS770:A.NZ/1
DA6:C.N3/1 2.82 219:C/1 3.27 ARG305:A.NH1/1
DT10:D.OP2/1 2.56 111:D/1 2.94 ARG557:A.NH2/1
DT10:D.OP2/1 2.73 131:D/1 3.09 SER739:A.OG/1
DT10:D.OP2/1 2.73 131:D/1 2.97 HIS740:A.N/1
DT10:D.OP2/1 2.73 131:D/1 2.94 HIS740:A.ND1/1
DT10:D.O2/1 2.98 1402:A/1 2.81 ARG305:A.NE/1
DC11:D.OP1/1 2.42 103:D/1 2.71 GLN457:A.OE1/1
DC11:D.OP2/1 2.93 167:D/1 3.12 SER739:A.N/1
DC11:D.OP2/1 2.46 106:D/1 2.89 SER739:A.OG/1
DC11:D.OP2/1 2.93 167:D/1 3.17 SER739:A.OG/1
DC11:D.O2/1 2.8 145:D/1 2.94 ARG305:A.NH1/1
DC12:D.O2/1 2.63 118:D/1 2.93 LYS770:A.NZ/1
DG13:D.OP1/1 2.69 126:D/1 3.02 LEU452:A.N/1
DG13:D.N2/1 2.99 174:D/1 3.21 LYS770:A.NZ/1
DA14:D.OP1/1 2.91 163:D/1 2.99 ARG451:A.O/1
DA14:D.OP2/1 2.66 123:D/1 3 ARG449:A.NH1/1
DA14:D.N3/1 2.8 144:D/1 3.04 ARG771:A.NH2/1
DA14:D.N3/1 2.8 144:D/1 2.82 GLY797:A.O/1
DC15:D.OP1/1 2.73 133:D/1 2.74 LEU766:A.O/1
DC15:D.OP2/1 2.85 155:D/1 2.96 ARG449:A.NH1/1
DC15:D.OP2/1 2.9 1327:A/1 2.75 ARG449:A.NH2/1
DG16:D.N2/1 3.1 143:D/1 2.88 PHE872:A.N/1
DG16:D.N3/1 2.8 143:D/1 2.88 PHE872:A.N/1
DA17:D.O4'/1 2.87 143:D/1 2.88 PHE872:A.N/1
DA17:D.O3'/1 3.23 1295:A/1 2.72 SER850:A.OG/1
DG19:D.OP1/1 2.92 1289:A/1 2.72 LEU851:A.O/1
DG19:D.OP1/1 2.92 1289:A/1 2.92 LYS866:A.NZ/1
DC20:D.OP1/1 2.49 107:D/1 2.63 THR640:A.O/1
DC20:D.OP1/1 2.49 107:D/1 2.79 LYS642:A.NZ/1
DC20:D.O2/1 2.7 130:D/1 2.76 ARG643:A.NH2/1
DA21:D.OP2/1 2.91 1131:A/1 2.47 LYS642:A.NZ/1
DA24:D.OP1/1 2.69 125:D/1 2.87 ALA421:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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