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Nucleic atom dist Protein atom
DT4:X.OP2/1 2.75 LYS939:A.N/1
DC5:X.OP2/1 2.74 LYS939:A.NZ/1
DA7:X.OP1/1 2.51 ARG692:B.NE/1
DT49:X.OP2/1 3 LYS944:A.N/1
DT53:X.O2/1 3.16 ARG436:B.NH1/1
DT53:X.O4/1 2.4 ARG746:B.NH1/1
DT54:X.OP1/1 3.02 ASN438:B.N/1
DT54:X.O2/1 3.31 ARG436:B.NH1/1
DT54:X.O2/1 2.8 HIS665:B.NE2/1
DT55:X.OP1/1 2.83 THR663:B.OG1/1
DT55:X.OP2/1 2.77 ASN438:B.ND2/1
DG57:X.OP2/1 3.35 ARG81:B.NH2/1
DT58:X.OP2/1 2.96 ARG81:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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