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Nucleic atom dist Protein atom
DA7:O.O3'/1 3.1 TYR41:G.OH/1
DA20:O.OP1/1 2.24 SER53:N.N/1
DA20:O.OP1/1 2.69 SER53:N.OG/1
DG22:O.OP1/1 2.46 TYR39:N.OH/1
DC28:O.OP1/1 2.42 ARG30:N.NH1/1
DA29:O.O5'/1 3.25 ARG32:M.NH1/1
DA30:O.OP1/1 2.44 ARG32:M.NH2/1
DT31:O.OP1/1 2.75 THR16:M.OG1/1
DT31:O.OP1/1 2.38 ARG17:M.N/1
DT32:O.OP1/1 3.31 LYS15:M.N/1
DT32:O.OP1/1 2.53 ARG20:M.NH2/1
DG40:O.OP1/1 2.83 SER84:N.N/1
DG40:O.OP1/1 3.16 THR85:N.N/1
DG40:O.OP1/1 2.99 THR85:N.OG1/1
DG40:O.OP2/1 3.44 ARG83:N.NH1/1
DG50:O.OP1/1 3.04 SER86:K.N/1
DG50:O.O5'/1 2.8 PHE84:K.O/1
DC51:O.OP1/1 2.36 ARG72:K.NH2/1
DC51:O.OP1/1 3.05 PHE84:K.N/1
DC51:O.OP1/1 3.14 PHE84:K.O/1
DC51:O.O5'/1 3.3 ARG72:K.NH1/1
DA61:O.OP1/1 2.8 ARG63:K.NH1/1
DA61:O.OP1/1 2.26 ARG36:L.NH2/1
DA61:O.OP2/1 2.49 ARG36:L.NH1/1
DG71:O.OP1/1 2.36 VAL117:K.N/1
DG71:O.OP1/1 2.72 THR118:K.N/1
DC81:O.O4'/1 3.09 ARG45:H.NH2/1
DC82:O.OP1/1 2.74 ILE46:H.N/1
DC82:O.OP2/1 2.66 ARG35:H.NH2/1
DC82:O.O3'/1 2.54 GLY44:G.N/1
DG83:O.OP1/1 2.8 VAL46:G.N/1
DG83:O.OP1/1 3.16 ALA47:G.N/1
DG83:O.O4'/1 2.52 ARG40:G.NH2/1
DG83:O.N3/1 3.1 ARG40:G.NH1/1
DC84:O.OP1/1 3.19 TYR41:G.N/1
DC84:O.O4'/1 2.63 ARG40:G.NH1/1
DA91:O.OP1/1 3.05 ARG69:G.NH2/1
DA91:O.OP2/1 2.53 ARG69:G.NH1/1
DC92:O.OP1/1 2.48 LYS64:G.N/1
DC92:O.OP2/1 2.54 LEU65:G.N/1
DG102:O.OP1/1 2.37 LYS79:H.N/1
DG102:O.OP1/1 2.65 THR80:H.N/1
DT112:O.OP1/1 2.35 ALA45:I.N/1
DA113:O.OP1/1 2.65 VAL43:I.N/1
DG122:O.OP1/1 2.78 TYR37:J.OH/1
DC123:O.OP1/1 3.29 ARG29:I.NH2/1
DA124:O.OP1/1 2.57 LYS31:J.N/1
DA124:O.OP1/1 3.03 LYS31:J.O/1
DA131:O.O4'/1 2.47 ARG77:I.NH2/1
DG132:O.OP1/1 2.44 THR76:I.N/1
DG132:O.OP1/1 2.93 ARG77:I.N/1
DG132:O.OP2/1 2.98 THR76:I.OG1/1
DC144:O.OP1/1 2.32 ARG42:K.N/1
DC144:O.OP2/1 3.13 ARG42:K.NH1/1
DC144:O.O5'/1 3.33 ARG42:K.NH1/1
DG145:O.OP2/1 3 ARG42:K.NH2/1
DC20:P.OP1/1 2.44 SER53:J.N/1
DC20:P.OP1/1 2.76 SER53:J.OG/1
DA21:P.OP1/1 2.94 ILE51:J.O/1
DC22:P.OP2/1 2.86 TYR39:J.OH/1
DC27:P.O3'/1 2.83 ARG30:J.NH2/1
DA31:P.OP1/1 2.89 THR16:I.OG1/1
DA31:P.OP1/1 3.14 ARG17:I.N/1
DA31:P.OP1/1 3.14 ARG17:I.NE/1
DA31:P.OP2/1 2.94 ARG17:I.NE/1
DA31:P.OP2/1 2.39 ARG17:I.NH2/1
DG32:P.OP1/1 2.89 LYS13:I.O/1
DG32:P.OP1/1 2.82 LYS15:I.N/1
DG32:P.OP1/1 3.03 LYS15:I.O/1
DG32:P.OP1/1 2.35 ARG20:I.NH2/1
DA40:P.OP1/1 2.73 THR85:J.N/1
DA40:P.OP1/1 2.56 THR85:J.OG1/1
DG41:P.OP2/1 2.96 ARG83:J.NE/1
DG41:P.OP2/1 2.52 ARG83:J.NH2/1
DT50:P.OP1/1 3.19 SER86:G.N/1
DT51:P.OP1/1 2.68 ARG72:G.NH2/1
DT51:P.OP1/1 3.25 PHE84:G.N/1
DA61:P.OP1/1 2.71 ARG63:G.NH1/1
DA61:P.OP1/1 2.25 ARG36:H.NH2/1
DA61:P.OP2/1 2.4 ARG36:H.NH1/1
DC63:P.OP1/1 2.43 ARG220:A.NH1/1
DC63:P.OP1/1 2.34 ARG272:A.NH2/1
DC65:P.OP1/1 2.43 ARG294:A.NH2/1
DG66:P.N2/1 2.99 ARG40:G.NH2/1
DA71:P.OP1/1 2.67 VAL117:G.N/1
DC81:P.OP1/1 2.94 SER47:L.OG/1
DC81:P.OP1/1 2.82 GLY48:L.N/1
DC81:P.O5'/1 2.97 ILE46:L.O/1
DC81:P.O4'/1 2.83 ARG45:L.NH2/1
DG82:P.OP1/1 2.77 ILE46:L.N/1
DG82:P.OP1/1 3.27 ILE46:L.O/1
DG82:P.OP2/1 2.83 ARG35:L.NH2/1
DG82:P.O3'/1 2.68 GLY44:K.N/1
DG82:P.N2/1 3.25 ARG40:K.NH2/1
DT83:P.OP1/1 2.58 GLY44:K.N/1
DT83:P.OP1/1 3 VAL46:K.N/1
DT83:P.OP2/1 3 ALA47:K.N/1
DT83:P.O4'/1 2.56 ARG40:K.NH2/1
DT83:P.O2/1 3.04 ARG40:K.NH1/1
DG84:P.OP1/1 2.71 TYR41:K.N/1
DG84:P.O4'/1 2.75 ARG40:K.NH1/1
DA91:P.OP1/1 2.36 ARG69:K.NH2/1
DA91:P.OP2/1 2.79 ARG69:K.NH1/1
DG92:P.OP1/1 2.5 LYS64:K.N/1
DG92:P.OP2/1 2.81 LEU65:K.N/1
DA100:P.O3'/1 3.37 ARG83:K.NH1/1
DA102:P.OP1/1 2.28 LYS79:L.N/1
DA102:P.OP1/1 2.78 THR80:L.N/1
DC104:P.OP1/1 3.1 THR29:J.OG1/1
DC111:P.O3'/1 2.74 ARG42:M.NH2/1
DG112:P.O4'/1 2.51 ARG42:M.NH2/1
DA113:P.OP1/1 2.84 VAL43:M.N/1
DG122:P.OP1/1 2.91 TYR37:N.OH/1
DC123:P.OP1/1 3.25 ARG29:M.NH2/1
DG124:P.OP1/1 2.57 LYS31:N.N/1
DG124:P.OP1/1 3 LYS31:N.O/1
DC132:P.OP1/1 2.76 THR76:M.N/1
DC132:P.OP1/1 2.52 ARG77:M.N/1
DC132:P.O5'/1 3.44 LYS75:M.NZ/1
DC144:P.OP1/1 3.48 ARG42:G.N/1
DC144:P.OP2/1 2.53 ARG42:G.NH1/1
DC144:P.O5'/1 2.72 ARG42:G.NH1/1
DG145:P.OP2/1 2.62 ARG42:G.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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