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Nucleic atom dist Protein atom
DT5:P.OP1/1 3.1 ARG696:A.NE/1
DT5:P.OP2/1 2.68 ARG696:A.NH2/1
DG6:P.OP1/1 3.04 SER694:A.N/1
DG6:P.OP2/1 2.36 SER694:A.OG/1
DG9:P.OP1/1 2.83 SER556:A.OG/1
DT10:P.OP1/1 2.93 GLY554:A.N/1
DT10:P.OP1/1 2.89 THR557:A.N/1
DT10:P.OP1/1 2.64 THR557:A.OG1/1
DT10:P.OP2/1 3.1 SER556:A.N/1
DA11:P.OP1/1 2.87 GLY552:A.N/1
DG12:P.OP2/1 3.01 ARG518:A.NH2/1
DG12:P.O3'/1 2.97 SER465:A.OG/1
DA2:T.OP2/1 2.93 HIS393:A.O/1
DT3:T.OP1/1 2.75 ASN397:A.N/1
DT3:T.OP2/1 2.77 THR395:A.N/1
DT3:T.OP2/1 2.74 LYS396:A.N/1
DC4:T.OP1/1 3 ASP399:A.N/1
DC4:T.OP1/1 2.72 LYS681:A.NZ/1
DC4:T.OP2/1 2.4 SER398:A.OG/1
DG5:T.OP1/1 2.86 ARG324:A.NH1/1
DG5:T.OP2/1 2.65 SER323:A.OG/1
DG5:T.OP2/1 3.35 LEU325:A.N/1
DG5:T.N7/1 2.91 MET685:A.N/1
DG5:T.O6/1 2.99 GLY686:A.N/1
DC6:T.OP1/1 2.65 TYR319:A.OH/1
DC6:T.OP1/1 2.77 ASN628:A.N/1
DC6:T.OP2/1 2.75 ASN628:A.ND2/1
DT7:T.OP1/1 2.68 HIS326:A.ND1/1
DT7:T.OP2/1 2.73 ASP626:A.N/1
DA8:T.OP1/1 2.96 ARG620:A.NH1/1
DA8:T.OP1/1 3.11 SER624:A.N/1
DA8:T.OP2/1 2.47 SER624:A.OG/1
DC9:T.OP1/1 3.11 LYS621:A.NZ/1
DC9:T.OP2/1 2.73 LYS621:A.N/1
DC12:T.OP1/1 2.98 LYS590:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:P.OP1/1 2.44 203:P/1 3.09 GLN663:A.NE2/1
DT5:P.OP1/1 2.44 203:P/1 2.83 SER694:A.OG/1
DT5:P.OP2/1 2.56 204:P/1 3.07 GLN663:A.NE2/1
DG6:P.OP2/1 2.83 1089:A/1 2.76 SER692:A.OG/1
DT7:P.OP2/1 2.68 924:A/1 2.52 SER690:A.OG/1
DT7:P.OP2/1 2.68 924:A/1 2.87 SER690:A.OG/1
DG9:P.OP1/1 2.85 907:A/1 2.43 SER556:A.OG/1
DG9:P.OP1/1 2.85 907:A/1 2.83 ARG560:A.NE/1
DG9:P.OP1/1 2.56 205:P/1 3.2 ARG560:A.NH2/1
DG9:P.OP1/1 2.95 229:P/1 3.21 ARG560:A.NH2/1
DG12:P.OP1/1 2.84 1102:A/1 2.79 LYS332:A.NZ/1
DG12:P.OP1/1 2.84 1102:A/1 2.77 ILE464:A.O/1
DG12:P.OP1/1 2.89 1091:A/1 2.76 ARG518:A.NH1/1
DG12:P.OP2/1 2.83 941:A/1 2.66 GLU468:A.OE1/1
DG12:P.OP2/1 2.83 941:A/1 2.57 ARG518:A.NH2/1
DG12:P.OP2/1 2.73 981:A/1 2.65 ARG518:A.NH2/1
DG12:P.O4'/1 2.88 963:A/1 2.62 LYS332:A.NZ/1
DG12:P.N2/1 2.89 908:A/1 2.43 SER329:A.OG/1
DG12:P.N3/1 2.94 963:A/1 2.62 LYS332:A.NZ/1
DT3:T.OP1/1 2.74 115:T/1 2.83 TYR682:A.N/1
DC4:T.OP2/1 2.79 991:A/1 3.01 HIS393:A.N/1
DC4:T.OP2/1 2.79 991:A/1 2.66 ASP399:A.O/1
DC4:T.OP2/1 2.79 991:A/1 2.69 TYR436:A.OH/1
DC4:T.O2/1 2.74 928:A/1 2.54 SER318:A.OG/1
DG5:T.OP1/1 2.61 107:T/1 2.92 ARG324:A.N/1
DG5:T.OP1/1 2.61 107:T/1 2.95 HIS393:A.NE2/1
DG5:T.OP1/1 2.61 107:T/1 3.11 TYR436:A.OH/1
DG5:T.O5'/1 2.78 119:T/1 3.06 ARG324:A.NH1/1
DG5:T.O6/1 2.88 127:T/1 2.92 LYS681:A.N/1
DC6:T.O2/1 2.89 908:A/1 2.43 SER329:A.OG/1
DT7:T.OP1/1 2.84 934:A/1 2.55 TYR649:A.OH/1
DT7:T.O2/1 2.63 908:A/1 2.43 SER329:A.OG/1
DA8:T.OP1/1 2.34 102:T/1 3.3 ARG620:A.NH2/1
DA8:T.OP2/1 2.37 103:T/1 2.58 SER622:A.OG/1
DC9:T.OP1/1 2.87 982:A/1 3.03 LYS336:A.NZ/1
DC9:T.OP1/1 2.87 982:A/1 2.65 VAL617:A.O/1
DC9:T.OP1/1 2.64 109:T/1 3.11 LEU618:A.O/1
DC9:T.OP2/1 2.77 946:A/1 2.59 SER622:A.OG/1
DC9:T.O5'/1 3.24 946:A/1 2.59 SER622:A.OG/1
DC10:T.OP1/1 2.61 108:T/1 2.78 LYS621:A.NZ/1
DC12:T.OP1/1 3 142:T/1 3.03 SER589:A.N/1
DC12:T.OP1/1 2.86 1183:A/1 2.85 LEU591:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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