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Nucleic atom dist Protein atom
DT14:I.OP1/1 2.62 GLU803:C.OE2/1
DT14:I.O3'/1 2.96 ASN934:C.ND2/1
DA15:I.OP1/1 2.57 ASN934:C.N/1
DA15:I.O3'/1 3.23 GLU709:C.OE1/1
DC16:I.OP1/1 2.63 GLU709:C.N/1
DC16:I.OP1/1 3.34 LYS710:C.N/1
DC16:I.OP1/1 2.98 HIS795:C.ND1/1
DC16:I.OP1/1 2.53 TYR935:C.OH/1
DC16:I.OP2/1 3.06 HIS795:C.ND1/1
DC17:I.OP1/1 2.66 LYS618:C.NZ/1
DC17:I.OP2/1 2.82 GLY601:C.O/1
DC17:I.N4/1 2.2 ASP600:C.OD1/1
DC17:I.N4/1 3.05 ASP708:C.OD2/1
DC17:I.N4/1 3.27 GLU962:C.OE2/1
DC20:I.OP2/1 2.93 LYS336:D.O/1
DC20:I.OP2/1 2.58 GLN337:D.O/1
DC20:I.OP2/1 2.4 SER340:D.N/1
DG21:I.OP2/1 2.56 LYS336:D.NZ/1
DG21:I.O6/1 2.69 MET847:A.O/1
DG25:I.N2/1 3.07 GLY722:A.O/1
DC26:I.OP1/1 2.7 GLU719:A.O/1
DC26:I.OP1/1 2.96 ARG39:B.N/1
DC26:I.OP2/1 2.94 SER40:B.N/1
DC27:I.OP1/1 2.63 VAL724:A.N/1
DC27:I.OP2/1 2.55 ARG773:A.NH1/1
DC27:I.OP2/1 2.59 ARG773:A.NH2/1
DG6:J.O3'/1 2.81 LYS119:B.NZ/1
DT8:J.O5'/1 2.63 LYS56:B.NZ/1
DG12:J.OP1/1 3.3 ARG826:A.NH1/1
DT14:J.OP2/1 2.75 GLU803:A.OE2/1
DT14:J.OP2/1 2.5 ARG927:A.NH2/1
DT14:J.OP2/1 3.13 LYS931:A.O/1
DC16:J.OP2/1 3.08 GLU709:A.N/1
DC16:J.OP2/1 2.23 TYR935:A.OH/1
DC17:J.OP2/1 2.62 GLU662:A.OE2/1
DC17:J.N3/1 3.02 HIS795:A.NE2/1
DC17:J.N4/1 2.35 ASP600:A.OD1/1
DC17:J.N4/1 2.62 ASP708:A.OD2/1
DC17:J.N4/1 3.36 GLU962:A.OE2/1
DG21:J.O6/1 2.82 MET847:C.O/1
DC26:J.OP1/1 2.93 ALA720:C.N/1
DC26:J.OP1/1 3.03 ARG39:D.NH1/1
DC26:J.OP2/1 2.44 ARG39:D.N/1
DC26:J.O3'/1 2.94 ARG773:C.NH2/1
DC27:J.OP1/1 3.23 VAL724:C.N/1
DC27:J.OP1/1 2.55 ARG773:C.NH1/1
DC27:J.OP1/1 2.86 ARG773:C.NH2/1
DA34:x.OP1/1 2.69 GLN495:A.OE1/1
DA34:x.OP1/1 2.55 GLN495:A.NE2/1
DA34:x.OP2/1 2.62 HIS501:A.NE2/1
DT36:x.OP1/1 2.63 HIS1006:C.ND1/1
DC41:x.OP1/1 2.92 HIS609:A.O/1
DC41:x.OP2/1 2.71 LYS856:C.NZ/1
DT42:x.OP1/1 2.58 HIS609:A.N/1
DG43:x.OP1/1 3.05 ARG972:A.NH1/1
DG43:x.O3'/1 2.96 LYS973:A.NZ/1
DG43:x.N7/1 2.8 ASN852:C.ND2/1
DG43:x.O6/1 2.81 ASN852:C.OD1/1
DG43:x.O6/1 2.82 ASN852:C.ND2/1
DT44:x.OP1/1 2.28 LYS973:A.NZ/1
DT44:x.O4/1 2.73 ASN852:C.ND2/1
DG45:x.OP1/1 2.48 ARG969:C.NH2/1
DG45:x.OP2/1 2.91 ARG969:C.NH2/1
DG45:x.N7/1 2.48 GLY851:C.N/1
DG45:x.O6/1 2.95 ARG855:C.NH1/1
DG45:x.N2/1 2.62 GLU959:C.OE2/1
DG45:x.N2/1 2.69 SER963:C.OG/1
DC17:M.O5'/1 2.28 GLU901:C.OE2/1
DA18:M.OP1/1 2.8 ARG894:C.O/1
DA18:M.O4'/1 2.71 GLU959:C.OE1/1
DA18:M.O3'/1 2.49 ASN647:C.ND2/1
DA18:M.N6/1 2.58 ASN852:C.OD1/1
DA18:M.N3/1 2.94 GLU959:C.OE1/1
DC19:M.OP1/1 2.88 ASN647:C.OD1/1
DC19:M.OP2/1 3.12 LYS645:C.NZ/1
DA20:M.OP1/1 2.77 SER648:C.OG/1
DG21:M.OP1/1 2.6 GLN480:A.NE2/1
DG21:M.OP2/1 2.8 LYS483:A.NZ/1
DT22:M.OP1/1 3.39 ARG970:C.NH1/1
DT22:M.O3'/1 2.59 MET974:A.O/1
DG23:M.OP1/1 2.29 CYS478:A.N/1
DG23:M.OP2/1 2.41 SER479:A.N/1
DG23:M.O3'/1 2.58 ASP986:A.OD2/1
DT26:y.OP2/1 2.79 HIS482:C.NE2/1
DC31:y.OP1/1 2.62 GLY610:C.O/1
DT32:y.OP1/1 2.6 GLU607:C.OE2/1
DT32:y.OP1/1 2.36 HIS609:C.N/1
DT32:y.OP2/1 2.63 ASN852:A.ND2/1
DT32:y.O2/1 3 GLN978:C.OE1/1
DG33:y.OP1/1 2.71 ARG972:C.NH1/1
DG33:y.N2/1 3.18 LYS966:A.NZ/1
DG33:y.N3/1 2.54 LYS966:A.NZ/1
DG35:y.OP1/1 2.57 ASN965:A.ND2/1
DG35:y.OP2/1 3.36 ARG969:A.NH2/1
DG35:y.O6/1 3.16 ARG855:A.NH1/1
DG35:y.O6/1 3.05 GLU959:A.OE1/1
DG35:y.N2/1 2.83 GLU962:A.O/1
DC17:L.O5'/1 2.93 GLU901:A.OE2/1
DA18:L.O4'/1 3 GLU959:A.OE2/1
DA20:L.OP1/1 2.33 SER648:A.OG/1
DG21:L.OP1/1 2.44 GLN480:C.NE2/1
DG21:L.OP2/1 2.37 LYS483:C.NZ/1
DG21:L.N2/1 2.44 GLN978:C.OE1/1
DT22:L.OP1/1 2.96 MET974:C.O/1
DT22:L.OP2/1 2.28 SER477:C.OG/1
DG23:L.OP1/1 2.37 CYS478:C.N/1
DG23:L.OP2/1 2.59 SER479:C.N/1
DG23:L.O4'/1 2.93 ASP986:C.OD2/1
DG24:L.OP2/1 2.62 ARG504:C.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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