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Nucleic atom dist Protein atom
DC4:E.OP1/1 3.03 ARG1272:B.NH1/1
DT6:E.OP1/1 2.7 LYS1043:B.NZ/1
DT6:E.OP2/1 3.27 HIS1046:B.NE2/1
DT6:E.OP2/1 2.59 ARG1092:B.NH2/1
DA7:E.OP2/1 2.72 HIS1079:B.NE2/1
DG8:E.OP1/1 2.85 HIS1081:B.ND1/1
DG8:E.OP1/1 3.03 ARG1122:D.NH1/1
DG8:E.OP2/1 3.28 GLY1082:B.N/1
DG8:E.OP2/1 3.01 ARG1122:D.NH2/1
DG8:E.O3'/1 2.59 GLU435:B.OE1/1
DG8:E.N3/1 3.12 LYS460:B.N/1
DC4:F.OP1/1 2.96 ARG1272:D.NH2/1
DT6:F.OP1/1 2.94 LYS1043:D.NZ/1
DA7:F.OP2/1 2.72 HIS1079:D.NE2/1
DG8:F.OP1/1 3.37 ARG1122:B.NH2/1
DG8:F.OP1/1 2.85 HIS1081:D.ND1/1
DG8:F.OP2/1 2.98 GLY1082:D.N/1
DG8:F.O3'/1 2.36 GLU435:D.OE2/1
DG8:F.N2/1 2.97 ARG458:D.O/1
DG8:F.N3/1 3.21 LYS460:D.N/1
DT2010:G.O2/1 3.21 ARG458:B.NH2/1
DT2014:G.OP1/1 3.04 ARG471:D.NE/1
DT2014:G.OP1/1 3.26 ARG471:D.NH2/1
DA2015:G.OP1/1 2.79 ASN463:D.N/1
DA2015:G.O3'/1 3.18 HIS515:D.NE2/1
DC2016:G.OP1/1 3.03 HIS515:D.NE2/1
DC2016:G.OP2/1 2.77 ASN463:D.ND2/1
DC2016:G.OP2/1 2.76 LYS466:D.NZ/1
DG2017:G.OP1/1 2.92 ARG629:D.NE/1
DG2017:G.OP1/1 2.75 GLY1178:D.N/1
DG2017:G.OP2/1 3.13 LYS466:D.NZ/1
DG2017:G.OP2/1 2.87 ARG629:D.NH2/1
DC2019:G.OP1/1 2.96 ARG1238:D.NH1/1
DC2019:G.OP2/1 3.13 ARG1238:D.NH2/1
DT2020:G.OP1/1 2.88 SER1330:D.OG/1
DT2010:H.OP1/1 2.67 ASP437:D.N/1
DT2010:H.OP1/1 2.94 SER438:D.N/1
DT2010:H.O2/1 2.87 ARG458:D.NH1/1
DA2015:H.OP1/1 2.81 ASN463:B.N/1
DA2015:H.O3'/1 3.04 HIS515:B.NE2/1
DC2016:H.OP1/1 2.88 HIS515:B.NE2/1
DC2016:H.OP2/1 2.69 ASN463:B.ND2/1
DC2016:H.OP2/1 2.86 LYS466:B.NZ/1
DG2017:H.OP1/1 2.91 ARG629:B.NE/1
DG2017:H.OP1/1 2.78 GLY1178:B.N/1
DG2017:H.OP2/1 3.1 LYS466:B.NZ/1
DG2017:H.OP2/1 2.94 ARG629:B.NH2/1
DT2020:H.OP1/1 3.17 SER1330:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:E.O4'/1 2.75 1705:E/1 3.2 SER1173:B.OG/1
DG5:E.N2/1 3.16 1888:B/1 2.86 ILE1175:B.O/1
DG5:E.N3/1 2.79 1706:E/1 2.97 ILE1175:B.N/1
DT6:E.O4'/1 3.04 1874:B/1 2.8 LYS1043:B.NZ/1
DA7:E.OP1/1 2.61 1701:E/1 2.88 ALA1032:B.O/1
DA7:E.OP1/1 2.67 1703:E/1 3.1 ARG1033:B.O/1
DA7:E.OP1/1 2.61 1701:E/1 3.11 ARG1033:B.NE/1
DA7:E.OP1/1 2.67 1703:E/1 2.9 VAL1045:B.N/1
DA7:E.N7/1 2.99 1907:B/1 2.94 SER1085:B.OG/1
DA7:E.N3/1 2.76 1853:B/1 2.73 LYS460:B.NZ/1
DA7:E.N3/1 2.76 1853:B/1 3.06 TYR1025:B.OH/1
DG8:E.O3'/1 3.11 1801:B/1 2.06 GLU435:B.OE1/1
DC4:F.OP1/1 2.44 101:F/1 2.66 ASN1269:D.ND2/1
DG5:F.O4'/1 2.86 105:F/1 3.06 SER1173:D.OG/1
DG5:F.N3/1 2.87 106:F/1 2.9 ILE1175:D.N/1
DT6:F.O4'/1 2.92 1785:D/1 2.82 LYS1043:D.NZ/1
DA7:F.OP1/1 2.75 104:F/1 2.88 ALA1032:D.O/1
DA7:F.OP1/1 2.63 103:F/1 2.95 ARG1033:D.O/1
DA7:F.OP1/1 2.75 104:F/1 3.21 ARG1033:D.NE/1
DA7:F.OP1/1 2.63 103:F/1 2.98 VAL1045:D.N/1
DA7:F.N3/1 2.95 1762:D/1 2.75 LYS460:D.NZ/1
DA7:F.N3/1 2.95 1762:D/1 3.09 TYR1025:D.OH/1
DG8:F.OP1/1 2.47 102:F/1 2.8 ARG1122:B.NH2/1
DA2015:G.N3/1 2.84 1703:D/1 2.4 TYR1025:D.OH/1
DC2016:G.OP1/1 2.78 2205:G/1 3.24 LYS466:D.NZ/1
DC2016:G.OP1/1 2.78 2205:G/1 2.89 LEU621:D.O/1
DC2016:G.O2/1 2.67 2203:G/1 3.02 ILE1175:D.O/1
DC2016:G.O2/1 2.67 2203:G/1 2.8 ALA1176:D.O/1
DG2018:G.OP1/1 2.74 1713:D/1 2.53 GLY1178:D.O/1
DG2018:G.OP1/1 2.86 1780:D/1 2.81 ALA1180:D.N/1
DG2018:G.OP1/1 2.86 1780:D/1 3.18 ALA1180:D.O/1
DG2018:G.OP1/1 2.86 1780:D/1 3.08 ASN1334:D.OD1/1
DC2019:G.OP1/1 2.75 1748:D/1 2.71 GLY1332:D.O/1
DC2019:G.O3'/1 2.93 1710:D/1 2.5 SER1240:D.OG/1
DT2020:G.OP1/1 3.12 1710:D/1 2.5 SER1240:D.OG/1
DG2009:H.OP1/1 2.91 1738:D/1 2.69 ASP508:D.OD2/1
DG2009:H.OP2/1 3.03 1738:D/1 2.69 ASP508:D.OD2/1
DA2015:H.OP1/1 2.66 1826:B/1 2.62 ASN463:B.O/1
DA2015:H.N3/1 2.98 1810:B/1 2.53 TYR1025:B.OH/1
DC2016:H.OP1/1 3.02 1904:B/1 3.26 LYS466:B.NZ/1
DC2016:H.OP1/1 3.02 1904:B/1 2.92 LEU621:B.O/1
DC2016:H.O2/1 2.7 2102:H/1 2.99 ALA1176:B.O/1
DG2018:H.OP1/1 2.75 1835:B/1 2.66 GLY1178:B.O/1
DG2018:H.OP1/1 2.76 2104:H/1 3.01 ALA1180:B.N/1
DG2018:H.OP1/1 2.76 2104:H/1 3.07 ASN1334:B.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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