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Nucleic atom dist Protein atom
DA45:I.OP2/1 2.69 SER56:H.N/1
DG46:I.OP1/1 2.68 ILE54:H.N/1
DG46:I.OP1/1 3.24 ILE54:H.O/1
DG46:I.O5'/1 2.28 TYR42:H.OH/1
DA55:I.OP1/1 3.02 ARG32:G.NE/1
DA55:I.OP1/1 3.03 ARG32:G.NH2/1
DA55:I.OP2/1 3.03 ARG32:G.NE/1
DT56:I.OP1/1 3.24 ARG17:G.N/1
DT57:I.OP1/1 3.18 ARG20:G.NH2/1
DG65:I.OP1/1 2.49 SER87:H.N/1
DG65:I.OP1/1 3.12 THR88:H.N/1
DG75:I.OP2/1 3.38 SER86:E.N/1
DC76:I.OP1/1 2.77 ARG72:E.NH1/1
DC76:I.OP1/1 2.49 PHE84:E.N/1
DC76:I.OP2/1 2.83 ARG72:E.NH2/1
DA86:I.OP1/1 2.37 ARG36:F.NH2/1
DA86:I.OP2/1 2.75 ARG36:F.NH1/1
DG96:I.OP1/1 2.78 VAL117:E.N/1
DG96:I.OP1/1 2.92 THR118:E.N/1
DG96:I.OP1/1 2.84 THR118:E.OG1/1
DG101:I.OP1/1 3.28 SER112:U.OG/1
DC106:I.OP2/1 2.98 GLY48:B.N/1
DC107:I.OP1/1 2.63 ILE46:B.N/1
DG108:I.OP1/1 2.6 GLY44:A.N/1
DG108:I.OP1/1 3.16 VAL46:A.N/1
DG108:I.OP1/1 3.23 ALA47:A.N/1
DC109:I.OP1/1 3.31 TYR41:A.N/1
DA116:I.OP1/1 3.14 ARG69:A.NH2/1
DA116:I.OP2/1 2.64 ARG69:A.NH1/1
DA116:I.OP2/1 2.96 ARG69:A.NH2/1
DC117:I.OP1/1 3.48 ARG63:A.NE/1
DC117:I.OP1/1 2.84 LYS64:A.N/1
DC117:I.OP2/1 2.83 LEU65:A.N/1
DG126:I.OP2/1 3.14 LYS79:B.NZ/1
DG127:I.OP1/1 3.09 LYS79:B.N/1
DT137:I.OP1/1 3.37 ALA45:C.N/1
DA138:I.OP1/1 2.55 VAL43:C.N/1
DC143:I.O4'/1 3.16 ARG11:C.NH1/1
DC143:I.O2/1 2.71 ARG11:C.NH1/1
DG147:I.OP1/1 2.61 TYR40:D.OH/1
DC148:I.OP1/1 2.67 ARG29:C.NH2/1
DA149:I.OP1/1 2.52 LYS34:D.N/1
DG157:I.OP1/1 2.5 THR76:C.N/1
DG157:I.OP1/1 2.88 THR76:C.OG1/1
DG157:I.OP1/1 2.83 ARG77:C.N/1
DA158:I.OP2/1 3.41 LYS75:C.NZ/1
DC169:I.OP1/1 3.1 ARG42:E.N/1
DC169:I.OP2/1 3.12 ARG42:E.NE/1
DC169:I.OP2/1 3.29 ARG42:E.NH2/1
DT178:I.OP1/1 2.67 TYR47:U.N/1
DA179:I.OP1/1 2.86 SER48:U.OG/1
DA179:I.OP2/1 2.69 GLY45:U.N/1
DC25:J.OP1/1 2.6 GLN82:U.NE2/1
DC45:J.OP1/1 2.45 SER56:D.N/1
DC45:J.OP1/1 2.87 SER56:D.OG/1
DC45:J.OP2/1 2.92 SER56:D.OG/1
DA46:J.OP1/1 2.86 ILE54:D.N/1
DC47:J.OP2/1 2.54 TYR42:D.OH/1
DG55:J.OP1/1 3.19 ARG32:C.NH2/1
DG55:J.N2/1 2.88 ARG11:C.NH2/1
DA56:J.OP1/1 3.34 ARG17:C.N/1
DA65:J.OP1/1 2.6 SER87:D.N/1
DA65:J.OP1/1 2.86 THR88:D.N/1
DG66:J.OP2/1 2.67 ARG86:D.NH1/1
DT76:J.OP1/1 2.79 ARG72:A.NH1/1
DT76:J.OP1/1 2.59 PHE84:A.N/1
DT76:J.OP2/1 2.89 ARG72:A.NH2/1
DA86:J.OP1/1 2.4 ARG36:B.NH2/1
DA86:J.OP2/1 2.76 ARG36:B.NH1/1
DG94:J.OP1/1 3.08 ARG42:A.NE/1
DG94:J.OP1/1 3.11 ARG42:A.NH2/1
DA96:J.OP1/1 2.69 VAL117:A.N/1
DA96:J.OP1/1 2.9 THR118:A.OG1/1
DG99:J.O3'/1 3.25 ARG85:U.NH1/1
DG99:J.N2/1 3.22 ASN110:U.OD1/1
DC100:J.OP1/1 3.01 ARG85:U.NH1/1
DC100:J.O2/1 3.04 ASN110:U.ND2/1
DG101:J.OP1/1 3.13 LYS93:U.NZ/1
DG107:J.OP1/1 2.34 ILE46:F.N/1
DG107:J.O3'/1 3.21 GLY44:E.N/1
DT108:J.OP1/1 2.88 GLY44:E.N/1
DT108:J.OP1/1 2.98 THR45:E.N/1
DT108:J.OP1/1 2.93 VAL46:E.N/1
DT108:J.OP1/1 3.32 ALA47:E.N/1
DG109:J.OP1/1 3.49 TYR41:E.N/1
DG109:J.O4'/1 3.04 ARG40:E.NH2/1
DA116:J.OP2/1 2.83 ARG69:E.NH1/1
DA116:J.OP2/1 3.13 ARG69:E.NH2/1
DG117:J.OP1/1 2.82 LYS64:E.N/1
DG117:J.OP2/1 2.94 LEU65:E.N/1
DA125:J.O3'/1 3.49 ARG83:E.NH2/1
DA127:J.OP1/1 2.95 LYS79:F.N/1
DA127:J.OP1/1 2.66 THR80:F.OG1/1
DA138:J.OP1/1 2.92 VAL43:G.N/1
DT143:J.O4'/1 3.39 ARG11:G.N/1
DG147:J.OP1/1 2.99 TYR40:H.OH/1
DC148:J.OP1/1 2.57 ARG29:G.NH1/1
DC148:J.OP1/1 2.66 ARG29:G.NH2/1
DG149:J.OP1/1 3.14 LYS34:H.N/1
DG149:J.O3'/1 3.07 ARG31:H.NH2/1
DC157:J.OP1/1 2.46 THR76:G.N/1
DC157:J.OP1/1 2.8 ARG77:G.N/1
DC157:J.OP2/1 3.04 THR76:G.OG1/1
DA158:J.OP2/1 2.77 LYS75:G.NZ/1
DC169:J.OP1/1 3.27 ARG42:A.N/1
DC170:J.OP2/1 2.44 ARG42:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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