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Nucleic atom dist Protein atom
DT4:T.OP1/1 2.86 GLU232:A.N/1
DT4:T.OP1/1 2.88 THR233:A.N/1
DT4:T.OP1/1 3.15 THR233:A.OG1/1
DT4:T.OP1/1 2.87 LYS234:A.N/1
DC5:T.OP1/1 3.45 LYS230:A.N/1
DT5:P.OP1/1 2.92 GLY107:A.N/1
DT5:P.OP1/1 3.04 ALA110:A.N/1
DT5:P.OP2/1 2.99 SER109:A.N/1
DG6:P.OP1/1 2.58 GLY105:A.N/1
DG6:P.OP1/1 3.27 ILE106:A.O/1
DG6:P.N2/1 3.04 LYS234:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT6:T.OP1/1 2.48 664:T/1 2.74 ASN133:A.ND2/1
DT6:T.OP1/1 2.48 664:T/1 2.76 HIS134:A.N/1
DT6:T.OP1/1 3.16 596:T/1 3.2 HIS135:A.N/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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