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Nucleic atom dist Protein atom
DT3:B.OP2/1 2.86 HIS29:A.ND1/1
DT4:B.O4/1 3.33 ARG22:A.NH1/1
DG5:B.O6/1 2.95 ARG22:A.NH1/1
DT6:B.O4/1 3.06 GLN18:A.NE2/1
DG2:C.OP1/1 3.09 ARG51:A.O/1
DG2:C.OP1/1 3.2 ARG51:A.NH2/1
DC3:C.OP1/1 2.71 TYR47:A.OH/1
DC3:C.OP1/1 2.87 ASN50:A.N/1
DC3:C.OP2/1 2.99 LEU6:A.N/1
DT4:C.OP1/1 3.02 ASN25:A.ND2/1
DT4:C.OP2/1 2.72 SER21:A.OG/1
DT4:C.O4/1 3 TYR17:A.OH/1
DC5:C.N4/1 2.73 GLN18:A.OE1/1
DC5:C.N4/1 3.42 ARG22:A.NH2/1
DA6:C.N7/1 3.13 ARG22:A.NH2/1
DA6:C.N6/1 2.89 ARG22:A.NH2/1
DC7:C.N4/1 3.4 ARG22:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT4:B.OP1/1 3.04 59:A/1 2.45 THR34:A.OG1/1
DG5:B.O5'/1 2.85 75:A/1 2.49 SER16:A.OG/1
DG7:B.N7/1 3.23 74:A/1 2.93 TYR17:A.OH/1
DA8:B.N6/1 3.22 74:A/1 2.93 TYR17:A.OH/1
DC1:C.O3'/1 3.04 1845:C/1 3.09 ARG51:A.NH1/1
DG2:C.OP1/1 2.86 1691:C/1 3.17 ARG51:A.NH2/1
DG2:C.OP2/1 2.85 70:A/1 2.78 THR5:A.OG1/1
DG2:C.N3/1 3.34 52:A/1 3.14 ASN50:A.ND2/1
DC5:C.OP2/1 2.84 827:C/1 2.95 GLN26:A.N/1
DA6:C.OP2/1 2.88 53:A/1 2.63 GLN26:A.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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