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Nucleic atom dist Protein atom
DT104:B.OP2/1 2.96 TRP23:A.O/1
DG105:B.N7/1 2.9 ARG24:A.NH1/1
DG105:B.N7/1 3.23 ARG24:A.NH2/1
DG105:B.O6/1 2.78 ARG24:A.NH2/1
DC118:C.OP1/1 2.44 ARG47:A.NH1/1
DC118:C.OP2/1 3.3 HIS43:A.NE2/1
DA120:C.OP2/1 2.33 ASN34:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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