Interaction mode
Mode:  H-Bb H-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj).
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SCOP Domain Family PDB entries Number of structures
Leucine zipper domain
(h.1.3.1)
1a02 1dgc 1dh3 1fos 1gd2 1h88 1h89 1h8a 1hjb 1io4 1jnm 1nwq 1s9k 1t2k 1ysa 2c9l 2c9n 2dgc 2e42 2e43 2h7h 40
HLH, helix-loop-helix DNA-binding domain
(a.38.1.1)
1am9 1hlo 1mdy 1nkp 1nlw 12
Classic zinc finger, C2H2
(g.37.1.1)
1a1g 1a1k 1jk2 1tf6 5
GerE-like (LuxR/UhpA family of transcriptional regulators)
(a.4.6.2)
1h0m 1l3l 5
Eukaryotic DNA topoisomerase I, dispensable insert domain
(a.2.8.1)
1rrj 1
Homeodomain
(a.4.1.1)
1o4x 1
Myb/SANT domain
(a.4.1.3)
2qhb 1
AraC type transcriptional activator
(a.4.1.8)
1bl0 1
CAP C-terminal domain-like
(a.4.5.4)
2cgp 1
A DNA-binding domain in eukaryotic transcription factors
(a.37.1.1)
1skn 1
MarR-like transcriptional regulators
(a.4.5.28)
1fzp 1
Eukaryotic DNA topoisomerase I, catalytic core
(d.163.1.2)
1a36 1
Nuclear receptor
(g.39.1.2)
1glu 1
© NPIDB team 2003 - 2017

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