Interaction mode
Mode:  H-Bb H-Mj H-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), helix(es) (H) with the minor groove of DNA (Mn).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
Sigma70_r2
(PF04542.16)
4xln 4xlp 4xlq 4xlr 5ipl 5ipm 5ipn 5tw1 5vi5 5vi8 6bzo 6c04 6ca0 6cce 6ccv 6dcf 6edt 6ee8 6eec 6jnx 6k4y 6kj6 6ldi 6m7j 6n62 6omf 6p18 6pmi 6pmj 6pst 6psu 6psv 6psw 6vvs 6vvt 6vvv 6vvx 6vvy 6vw0 6wmu 6wr8 6wrd 6wrg 7c17 7ckq 7khb 7khe 7khi 51
XPG_N
(PF00752.19)
4q0w 4q0z 4q10 5v04 5v05 5v06 5v07 5v08 5v09 12
DNA_pol_B_thumb
(PF14791.8)
4xq8 4xrh 5chg 5cj7 5cr0 5ddm 5xm9 5xma 12
HMG_box_2
(PF09011.12)
5zdz 5ze0 5ze1 5ze2 6cik 5
HMG_box
(PF00505.21)
5jh0 6cij 6cik 6cim 5
zf-H2C2_2
(PF13465.8)
2jp9 2jpa 5eh2 3
RNA_pol
(PF00940.21)
1h38 1s0v 5
RNA_pol_Rpb2_3
(PF04565.18)
4g7z 6kqn 2
Exog_C
(PF18026.3)
5t4i 5t5c 2
Resolvase
(PF00239.23)
5cy1 1
DNA_topoisoIV
(PF00521.22)
6n1p 1
ERCC4
(PF02732.17)
2bgw 1
DNA_pol3_alpha
(PF07733.14)
5m1s 1


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