Interaction mode
Mode:  H-Bb H-Mj H-Mn L-Bb 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), helix(es) (H) with the minor groove of DNA (Mn), loop(s) (L) with DNA backbone atoms (Bb).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
4nnu 4nod 3tq6 3tmm 9
3tq6 4qr9 1ckt 5
2yvh 1
3jca 1
4xlq 1

SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
DNA polymerase beta, N-terminal domain-like
2bcq 2bcr 2bcs 2bcu 2bcv 2i9g 6
Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1t38 1t39 1yfh 4
GalR/LacI-like bacterial regulator
1efa 1rzr 2pe5 3
T7 RNA polymerase
1h38 1s0v 7
Uracil-DNA glycosylase
4skn 1
Nuclear receptor
2nll 1
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