Interaction mode
Mode:  H-Bb H-Mj S-Bb 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
Forkhead
(PF00250.17)
2as5 2uzk 3qrf 4wk8 6
MerR_1
(PF13411.5)
5c8e 5i44 4
CENP-X
(PF09415.9)
4ndy 2
Ets
(PF00178.21)
3wty 1
Penicillinase_R
(PF03965.15)
1sax 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Viral DNA-binding domain
(d.58.8.1)
2ayg 2
Classic zinc finger, C2H2
(g.37.1.1)
2gli 1
Penicillinase repressor
(a.4.5.39)
1sax 1
© NPIDB team 2003 - 2017

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