Interaction mode
Mode:  H-Bb H-Mj S-Bb S-Mj L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
B3
(PF02362.23)
5yzy 5yzz 5z00 6j9c 4
GATA
(PF00320.29)
3vek 4hca 3
zf-C2H2
(PF00096.28)
2kmk 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Rel/Dorsal transcription factors, DNA-binding domain
(b.2.5.3)
1svc 1
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