Interaction mode
Mode:  H-Bb H-Mj S-Mj L-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the major groove of DNA (Mj), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
Export table
Pfam Domain Family PDB entries Number of structures
RHD_DNA_bind
(PF00554.21)
3gut 2o61 2i9t 1ram 1le9 1a3q 10
GATA
(PF00320.26)
7gat 6gat 4gat 3


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
Export table
SCOP Domain Family PDB entries Number of structures
Zinc finger design
(k.12.1.1)
1g2d 1g2f 3
© NPIDB team 2003 - 2017

text