Interaction mode
Mode:  H-Bb H-Mn S-Bb L-Bb 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), helix(es) (H) with the minor groove of DNA (Mn), β-strand(s) (S) with DNA backbone atoms (Bb), loop(s) (L) with DNA backbone atoms (Bb).
Pfam domains
Export table
Pfam Domain Family PDB entries Number of structures
DNA_pol_B_thumb
(PF14791.5)
4rq2 4rq0 4rpx 4rq6 4rq8 4tuq 4rq3 4uaw 4z6f 4z6e 4ymo 4ubc 4ub5 4ub4 4ub3 4uay 4r65 4php 2fms 3c2k 3gdx 3lk9 3rjf 3rji 3tfr 3tfs 4f5r 4gxj 4jwm 4kld 4nlk 4nxz 4o5k 4pgx 5bol 35
DNA_pol_A
(PF00476.19)
4ktq 1
DNA_ligase_aden
(PF01653.17)
4glx 1
Endonuclease_1
(PF04231.12)
2ivk 1
zf-His_Me_endon
(PF05551.10)
1ipp 1


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