Interaction mode
Mode:  H-Bb S-Bb S-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
MetJ
(PF01340.19)
1mjq 1mjo 1mj2 1mjm 7
Omega_Repress
(PF07764.10)
2cax 2bnz 2bnw 6
MatP_C
(PF17414.1)
3vea 3veb 4d8j 5
RHH_1
(PF01402.20)
1ea4 6
LAGLIDADG_1
(PF00961.18)
4z1z 1
Arc
(PF03869.13)
3qoq 1
Tra_M
(PF05261.10)
3on0 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Met repressor, MetJ (MetR)
(a.43.1.5)
1mj2 1mjm 1mjo 1mjp 1mjq 8
Arc/Mnt-like phage repressors
(a.43.1.1)
1bdv 2
CopG-like
(a.43.1.3)
1ea4 9
Intron-encoded homing endonucleases
(d.4.1.3)
1evw 1
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