Interaction mode
Mode:  H-Bb S-Bb S-Mj L-Bb L-Mj L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj), loop(s) (L) with the minor groove of DNA (Mn).
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SCOP Domain Family PDB entries Number of structures
Restriction endonuclease EcoRV
1b94 1b95 1b96 1bss 1bsu 1bua 1eo3 1eop 1rv5 1rva 1rvb 1rvc 1stx 1suz 1sx5 1sx8 2b0d 2b0e 4rve 24
C5 cytosine-specific DNA methylase, DCM
10mh 1fjx 1m0e 1mht 1skm 2c7p 2c7q 2c7r 3mht 6mht 7mht 8mht 12
Restriction endonuclease HincII
1kc6 1tw8 1tx3 1xhu 1xhv 2gie 21
T7 RNA polymerase
1cez 2pi4 2pi5 3
Group I mobile intron endonuclease
1r7m 2
Replication terminator protein (Tus)
2i05 1
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