Interaction mode
Mode:  H-Bb S-Bb S-Mn L-Bb L-Mj L-Mn 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the minor groove of DNA (Mn), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj), loop(s) (L) with the minor groove of DNA (Mn).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
Pur_DNA_glyco
(PF02245.18)
1bnk 1ewn 1f4r 1f6o 3qi5 6
Fapy_DNA_glyco
(PF01149.26)
2f5p 3gpx 3gq3 3gq5 3u6l 5
Histone
(PF00125.26)
2fj7 1
Bac_DNA_binding
(PF00216.23)
5wfe 1
MutS_I
(PF01624.22)
3thy 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
(b.46.1.2)
1bnk 1f4r 2
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