Interaction mode
Mode:  H-Bb S-Mj L-Bb L-Mj 
Description: Conserved protein-DNA contacts are provided by helix(es) (H) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj), loop(s) (L) with DNA backbone atoms (Bb), loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
BamHI
(PF02923.14)
1bhm 2bam 3
Arc
(PF03869.13)
1par 3qoq 2
RHD_DNA_bind
(PF00554.21)
1a66 1
MazE_antitoxin
(PF04014.17)
2k1n 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Trafficking protein A-like
(a.43.1.8)
2bsq 2h1o 2
Group I mobile intron endonuclease
(d.95.2.1)
1r7m 1
© NPIDB team 2003 - 2017

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