Interaction mode
Mode:  L-Bb 
Description: Conserved protein-DNA contacts are provided by loop(s) (L) with DNA backbone atoms (Bb).
Export table
SCOP Domain Family PDB entries Number of structures
DnaQ-like 3'-5' exonuclease
1ig9 1njy 1njz 1q9x 1q9y 1t8e 1tk0 1tk8 1tkd 1ua1 1x9m 1x9w 1zyq 2dy4 2oyq 2ozm 2ozs 2p5g 2p5o 3cq8 25
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
1a3q 1le5 1le9 1lei 1nfk 1owr 1pzu 1ram 1svc 1vkx 2i9t 2o61 2o93 2ram 2v2t 29
N-terminal domain of MutM-like DNA repair proteins
1k3x 1l2b 1r2y 1r2z 2f5q 2f5s 6
Middle domain of MutM-like DNA repair proteins
1k3w 1k82 2ea0 2f5s 2oq4 8
DNA repair protein MutS, domain I
1e3m 1ng9 1nne 1oh8 4
Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
1oe4 1oe5 1oe6 3
Leucine zipper domain
1hwt 2hap 3
C-terminal, Zn-finger domain of MutM-like DNA repair proteins
1l2b 2oq4 2
ets domain
1hbx 2
T4 endonuclease V
2fcc 2
Nucleosome core histones
1kx3 1
GalR/LacI-like bacterial regulator
1jwl 1
Endonuclease III
1p59 1
Mismatch glycosylase
1vrl 1
Trp repressor, TrpR
1co0 1
DNA repair protein MutS, domain III
1oh8 1
1srs 1
Classic zinc finger, C2H2
2gli 1
DNA-binding domains of HMG-I(Y)
2ezf 1
RecG "wedge" domain
1gm5 1
Achaeal helicase C-terminal domain
2p6r 1
© NPIDB team 2003 - 2017