Interaction mode
Mode:  L-Mj 
Description: Conserved protein-DNA contacts are provided by loop(s) (L) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
TAL_effector
(PF03377.12)
4osk 4osi 3ugm 10
IN_DBD_C
(PF00552.20)
5ejk 2
DNA_pol_B_exo1
(PF03104.18)
3iay 1
RNA_pol_Rpb2_2
(PF04561.13)
5fmf 1
RNA_pol_Rpb2_1
(PF04563.14)
5fmf 1
RNA_pol_Rpb2_3
(PF04565.15)
4q4z 1
RAG1
(PF12940.6)
3jbw 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Rel/Dorsal transcription factors, DNA-binding domain
(b.2.5.3)
1le9 1
DnaQ-like 3'-5' exonuclease
(c.55.3.5)
2pyj 1
© NPIDB team 2003 - 2017

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