Interaction mode
Mode:  S-Bb S-Mj 
Description: Conserved protein-DNA contacts are provided by β-strand(s) (S) with DNA backbone atoms (Bb), β-strand(s) (S) with the major groove of DNA (Mj).
Pfam domains
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Pfam Domain Family PDB entries Number of structures
zf-FPG_IleRS
(PF06827.16)
3go8 3gp1 3gpu 3gpx 3gq5 3sau 3u6c 3u6d 3u6l 3u6o 3u6p 3u6s 4g4n 4g4r 14
Tra_M
(PF05261.13)
4qpq 7
MatP_C
(PF17414.4)
4d8j 2
Arc
(PF03869.16)
3qoq 1
MotCF
(PF09158.12)
5jlt 1
Neil1-DNA_bind
(PF09292.12)
5itt 1


SCOP domains
Note: this data is based only on structures available at the moment of the last SCOP release (2009)
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SCOP Domain Family PDB entries Number of structures
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
(e.15.1.1)
1k4s 1
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