Pfam domain
Pfam family: RNA_pol_Rpb1_5 (PF04998.16)
Uniprot AC: P04050
RecName: DNA-directed RNA polymerase II subunit RPB1
Begin-End: 807-1397
Organism: Saccharomyces cerevisiae
Interaction Mode:  H-Bb L-Bb L-Mn 

Sequence:
GLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQF
IYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQ
VLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDI
VLGVKDLQENLLVLRGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVL
SNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILN
VAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPED
EEIIQLHFSLLDEEAEQSFDQQSPWLLRLELDRAAMNDKDLTMGQVGERIKQTFKNDLFV
IWSEDNDEKLIIRCRVVRPKSLDAETEAEEDHMLKKIENTMLENITLRGVENIERVVMMK
YDRKVPSPTGEYVKEPEWVLETDGVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRA
ALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGAL
Structures of the domain P04050 807-1397
Export table
PDB ID Exp. data Chain Begin-End Interaction mode
2nvx X-ray 3.6 A 807-1396 None
3hox X-ray 3.65 A 807-1396 None
3hoy X-ray 3.4 A 807-1396 None
3hoz X-ray 3.65 A 807-1396 None
4a3j X-ray 3.7 A 807-1396 None
1y1w X-ray 4 A 807-1396 None
3s15 X-ray 3.3 A 807-1396 None
2ja6 X-ray 4 A 807-1396 None
4y7n X-ray 3.3 A 807-1396 None
3s1r X-ray 3.2 A 807-1396 None
2yu9 X-ray 3.4 A 807-1396 None
3gto X-ray 4 A 807-1396 None
6bqf X-ray 3.35 A 807-1396 None
1sfo X-ray 3.61 A 807-1396 None
1y1y X-ray 4 A 807-1396 None
2e2j X-ray 3.5 A 807-1396 None
3m4o X-ray 3.57 A 807-1396 None
3gtm X-ray 3.8 A 807-1396 None
2nvz X-ray 4.3 A 807-1396 None
1r9s X-ray 4.25 A 807-1396 None
2vum X-ray 3.4 A 807-1396  L-Bb 
2r7z X-ray 3.8 A 807-1396 None
2e2i X-ray 3.41 A 807-1396 None
3gtk X-ray 3.8 A 807-1396 None
2b63 X-ray 3.8 A 807-1396 None
3po2 X-ray 3.3 A 807-1396  H-Bb L-Bb L-Mn 
1r9t X-ray 3.5 A 807-1396 None
2ja7 X-ray 3.8 M 807-1396 None
2ja7 X-ray 3.8 A 807-1396 None
2e2h X-ray 3.95 A 807-1396 None
1y77 X-ray 4.5 A 807-1396 None
3hou X-ray 3.2 A 807-1396 None
3hou X-ray 3.2 M 807-1396 None
3hov X-ray 3.5 A 807-1396 None
3m3y X-ray 3.18 A 807-1396 None
4y52 X-ray 3.5 A 807-1396 None
6blo X-ray 3.4 A 807-1396 None
2nvt X-ray 3.36 A 807-1396 None
3i4n X-ray 3.9 A 807-1396 None
3how X-ray 3.6 A 807-1396 None
3gtq X-ray 3.8 A 807-1396 None
3s1q X-ray 3.3 A 807-1396 None
3s16 X-ray 3.24 A 807-1396 None
3i4m X-ray 3.7 A 807-1396 None
4bbs X-ray 3.6 A 807-1396 None
5c44 X-ray 3.95 A 807-1396 None
1i6h X-ray 3.3 A 807-1396 None
3gtj X-ray 3.42 A 807-1396 None
5fmf X-ray 6 A 807-1396 None
3gtp X-ray 3.9 A 807-1396 None
5c3e X-ray 3.7 A 807-1396 None
5c4x X-ray 4 A 807-1396 None
2ja8 X-ray 3.8 A 807-1396 None
2nvq X-ray 2.9 A 807-1396 None
3rzo X-ray 3 A 807-1396 None
5c4a X-ray 4.2 A 807-1396 None
5c4j X-ray 4 A 807-1396 None
3gtg X-ray 3.78 A 807-1396 None
3s2d X-ray 3.2 A 807-1396 None
3s1n X-ray 3.1 A 807-1396 None
3rzd X-ray 3.3 A 807-1396 None
4v1m X-ray 6.6 A 807-1396  L-Bb 
2ja5 X-ray 3.8 A 807-1396 None
3s14 X-ray 2.85 A 807-1396 None
3s1m X-ray 3.13 A 807-1396 None
2r93 X-ray 4 A 807-1396 None
6bm2 X-ray 3.4 A 807-1396 None
4x67 X-ray 4.1 A 807-1396 None
6bm4 X-ray 2.95 A 807-1396 None
4v1o X-ray 9.7 A 807-1396  L-Bb L-Mn 
3s17 X-ray 3.2 A 807-1396 None
3h3v X-ray 4 B 807-1396 None
3po3 X-ray 3.3 A 807-1396 None
2r92 X-ray 3.8 A 807-1396 None
3s2h X-ray 3.3 A 807-1396 None
6blp X-ray 3.2 A 807-1396 None
5vvs X-ray 6.4 A 807-1396  L-Bb 
5oqj X-ray 4.7 A 807-1396  L-Bb 
3gtl X-ray 3.38 A 807-1396 None
4x6a X-ray 3.96 A 807-1396 None
5vvr X-ray 5.8 A 807-1396 None
5sva X-ray 15.3 A 807-1396 None
5fyw X-ray 4.35 A 807-1396 None


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