Domains of Pfam family RNA_pol_Rpb1_5 (PF04998.19 )
Domain ID Uniprot AC Species Begin-End #Structures Interaction modes
A0A063XB23_770-1131 A0A063XB23 Bacillus subtilis 770-1131 1  H-Bb *
A0QS66_797-940 A0QS66 Mycobacterium smegmatis 797-940 1
A0QS66_811-974 A0QS66 Mycobacterium smegmatis 811-974 1
A0QS66_831-998 A0QS66 Mycobacterium smegmatis 831-998 1
A0QS66_840-1007 A0QS66 Mycobacterium smegmatis 840-1007 3
A0QS66_968-1114 A0QS66 Mycobacterium smegmatis 968-1114 1
A0QS66_999-1132 A0QS66 Mycobacterium smegmatis 999-1132 1
A0QS66_1026-1175 A0QS66 Mycobacterium smegmatis 1026-1175 1
A0QS66_1032-1185 A0QS66 Mycobacterium smegmatis 1032-1185 3
A7ZUK2_766-1317 A7ZUK2 Escherichia coli O139:H28 766-1317 3
B2SQQ2_767-1318 B2SQQ2 Xanthomonas oryzae pv. oryzae 767-1318 2  H-Bb *
C3SIA2_766-1317 C3SIA2 Escherichia coli 766-1317 9
C4R4Y0_808-1400 C4R4Y0 Komagataella phaffii 808-1400 16
G3MZY8_830-1427 G3MZY8 Bos taurus 830-1427 2  H-Bb *
I3LJR4_811-1399 I3LJR4 Sus scrofa 811-1399 3  H-Mn *
 L-Bb *
O57204_725-1212 O57204 Vaccinia virus 725-1212 1
P04050_807-1397 P04050 Saccharomyces cerevisiae 807-1397 115  H-Bb *
 H-Bb L-Bb L-Mn *
 H-Bb L-Mn *
 L-Bb *
 L-Bb L-Mn *
 L-Mn *
P04051_855-1384 P04051 Saccharomyces cerevisiae 855-1384 11  H-Bb L-Mn *
 L-Bb *
P0A8T7_753-933 P0A8T7 Escherichia coli 753-933 1
P0A8T7_754-1284 P0A8T7 Escherichia coli 754-1284 2  L-Bb *
P0A8T7_754-1305 P0A8T7 Escherichia coli 754-1305 2  L-Bb *
P0A8T7_766-1317 P0A8T7 Escherichia coli 766-1317 63  H-Bb *
 H-Bb L-Bb *
 L-Bb *
 S-Bb *
 S-Bb L-Bb *
P0A8T7_929-1108 P0A8T7 Escherichia coli 929-1108 1
P0A8T8_766-1317 P0A8T8 Escherichia coli O157:H7 766-1317 8  H-Bb *
 H-Bb L-Bb *
P10964_989-1611 P10964 Saccharomyces cerevisiae 989-1611 24  H-Bb *
 L-Bb *
P24928_830-1427 P24928 Homo sapiens 830-1427 9  H-Bb *
 L-Bb *
P9WGY7_842-1012 P9WGY7 Mycobacterium tuberculosis 842-1012 25  H-Bb 
P9WGY7_843-1218 P9WGY7 Mycobacterium tuberculosis 843-1218 3  H-Bb L-Bb *
P9WGY7_846-1020 P9WGY7 Mycobacterium tuberculosis 846-1020 4
P9WGY7_1045-1191 P9WGY7 Mycobacterium tuberculosis 1045-1191 1
P9WGY7_1046-1197 P9WGY7 Mycobacterium tuberculosis 1046-1197 3
P9WGY7_1047-1203 P9WGY7 Mycobacterium tuberculosis 1047-1203 21
P9WGY7_1052-1204 P9WGY7 Mycobacterium tuberculosis 1052-1204 4
Q5JE33_811-896 Q5JE33 Thermococcus kodakarensis 811-896 1
Q5JE34_7-334 Q5JE34 Thermococcus kodakarensis 7-334 1  L-Bb *
Q72HM6_1064-1304 Q72HM6 Thermus thermophilus 1064-1304 1  H-Bb *
Q72HM6_1282-1432 Q72HM6 Thermus thermophilus 1282-1432 1  L-Bb *
Q8RQE8_1063-1424 Q8RQE8 Thermus thermophilus 1063-1424 2  H-Bb 
Q8RQE8_1064-1271 Q8RQE8 Thermus thermophilus 1064-1271 3  H-Bb H-Mn L-Bb *
 H-Bb L-Bb *
Q8RQE8_1064-1296 Q8RQE8 Thermus thermophilus 1064-1296 63  H-Bb 
 H-Bb L-Bb *
Q8RQE8_1266-1432 Q8RQE8 Thermus thermophilus 1266-1432 66  H-Bb *
 H-Bb L-Bb *
 L-Bb 
Q9KWU6_1064-1291 Q9KWU6 Thermus aquaticus 1064-1291 14
Q9KWU6_1269-1432 Q9KWU6 Thermus aquaticus 1269-1432 14
U9YPW3_766-1317 U9YPW3 Escherichia coli 110957 766-1317 1  L-Bb *
Interaction class: Miscellaneous

* interaction modes not found in water-containing structures resolved with X-RAY DIFFRACTION method having resolution better than 3 Angstrom

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