SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Ribbon-helix-helix
      Superfamily:
 Ribbon-helix-helix
        Family:
 Met repressor, MetJ (MetR)
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Ribbon-helix-helix
      Superfamily:
 Ribbon-helix-helix
        Family:
 Met repressor, MetJ (MetR)
protein domain  species  PDB ID  instances  bonded 
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1mjq 8 8
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1cma 2 2
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1mjp 2 2
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1mjo 4 4
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1mjm 2 2
Met repressor, MetJ (MetR) Escherichia coli [TaxId: 562] 1mj2 4 4
Total: 6 22 22
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb S-Bb S-Mj L-Bb 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Met repressor, MetJ (MetR) [ a.43.1.5 ]
Analized complexes: 10
Complexes with DNA: 6
Conserved water: 88
Download:
Sequence alignment: a_43_1_5.fas ]
Sequence alignment with secondary structure: a_43_1_5_with_ss.fas ]
Superposition in PDB format: a.43.1.5.pdb ]
Alignment in MSF: a_43_1_5.msf ]
Image of alignment with secondary structure marked: a_43_1_5.PNG ]
Water clusters: a.43.1.5.flat.txt ]
a.43.1.5.pivot.txt ]
RasMol script: a.43.1.5.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1cmc A - - 1
ON
1cmc B - - 2
ON
1cmb A - - 3
ON
1cmb B - - 4
ON
1mjk A - - 5
ON
1mjk B - - 6
ON
1mjl A - - 7
ON
1mjl B - - 8
ON
1mjo A - - 9
ON
1mjo B - - 10
ON
1mjo C - - 11
ON
1mjo D - - 12
ON
1mjm A - - 13
ON
1mjm B - - 14
ON
1mj2 A - - 15
ON
1mj2 B - - 16
ON
1mj2 C - - 17
ON
1mj2 D - - 18
ON
1mjq A - - 19
ON
1mjq B - - 20
ON
1mjq C - - 21
ON
1mjq D - - 22
ON
1mjq G - - 23
ON
1mjq H - - 24
ON
1mjq I - - 25
ON
1mjq J - - 26
ON
1cma A - - 27
ON
1cma B - - 28
ON
1mjp A - - 29
ON
1mjp B - - 30
ON
© NPIDB team 2003 - 2017

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