SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 "Winged helix" DNA-binding domain
        Family:
 39 kda initiator binding protein, IBP39, N-terminal domain
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 "Winged helix" DNA-binding domain
        Family:
 39 kda initiator binding protein, IBP39, N-terminal domain
protein domain  species  PDB ID  instances  bonded 
39 kda initiator binding protein, IBP39, N-terminal domain Trichomonas vaginalis [TaxId: 5722] 1pp7 1 1
39 kda initiator binding protein, IBP39, N-terminal domain Trichomonas vaginalis [TaxId: 5722] 1pp8 6 4
Total: 2 7 5
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj S-Bb L-Bb L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: 39 kda initiator binding protein, IBP39, N-terminal domain [ a.4.5.44 ]
Analized complexes: 2
Complexes with DNA: 2
Conserved water: 0
Download:
Sequence alignment: a_4_5_44.fas ]
Sequence alignment with secondary structure: a_4_5_44_with_ss.fas ]
Superposition in PDB format: a.4.5.44.pdb ]
Alignment in MSF: a_4_5_44.msf ]
Image of alignment with secondary structure marked: a_4_5_44.PNG ]
Water clusters: NONE
NONE
RasMol script: NONE
PDB ID Chain Start residue End residue Model number Show
1pp7 U - - 1
ON
1pp8 F - - 2
ON
1pp8 M - - 3
ON
1pp8 O - - 4
ON
1pp8 P - - 5
ON
1pp8 U - - 6
ON
1pp8 V - - 7
ON
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