SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Long alpha-hairpin
      Superfamily:
 Eukaryotic DNA topoisomerase I, dispensable insert domain
        Family:
 Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Long alpha-hairpin
      Superfamily:
 Eukaryotic DNA topoisomerase I, dispensable insert domain
        Family:
 Eukaryotic DNA topoisomerase I, dispensable insert domain
protein domain  species  PDB ID  instances  bonded 
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1seu 1 0
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1t8i 1 0
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1a36 1 1
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1tl8 1 0
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1lpq 1 0
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1k4t 1 0
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1r49 1 1
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1rrj 1 1
Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606] 1sc7 1 1
Total: 9 9 4
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj 
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: Eukaryotic DNA topoisomerase I, dispensable insert domain [ a.2.8.1 ]
Analized complexes: 9
Complexes with DNA: 9
Conserved water: 1
Download:
Sequence alignment: a_2_8_1.fas ]
Sequence alignment with secondary structure: a_2_8_1_with_ss.fas ]
Superposition in PDB format: a.2.8.1.pdb ]
Alignment in MSF: a_2_8_1.msf ]
Image of alignment with secondary structure marked: a_2_8_1.PNG ]
Water clusters: a.2.8.1.flat.txt ]
a.2.8.1.pivot.txt ]
RasMol script: a.2.8.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1k4t A 641 712 1
ON
1rrj A 636 712 2
ON
1a36 A 641 712 3
ON
1sc7 A 636 712 4
ON
1seu A 636 712 5
ON
1tl8 A 636 712 6
ON
1t8i A 636 712 7
ON
1lpq A 641 712 8
ON
1r49 A 644 713 9
ON
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