SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 Homeodomain-like
        Family:
 Centromere-binding
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 Homeodomain-like
        Family:
 Centromere-binding
protein domain  species  PDB ID  instances  bonded 
DNA-binding domain of centromere binding protein B (CENP-B) Human (Homo sapiens) [TaxId: 9606] 1hlv 2 2
Total: 1 2 2
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj L-Bb L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: low
Analized family: Centromere-binding [ a.4.1.7 ]
Analized complexes: 3
Complexes with DNA: 1
Conserved water: 1
Download:
Sequence alignment: a_4_1_7.fas ]
Sequence alignment with secondary structure: a_4_1_7_with_ss.fas ]
Superposition in PDB format: a.4.1.7.pdb ]
Alignment in MSF: a_4_1_7.msf ]
Image of alignment with secondary structure marked: a_4_1_7.PNG ]
Water clusters: a.4.1.7.flat.txt ]
a.4.1.7.pivot.txt ]
RasMol script: a.4.1.7.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1hlv A 1 66 1
ON
1hlv A 67 131 2
ON
1bw6 A - - 3
ON
1iuf A 2 75 4
ON
1iuf A 76 141 5
ON
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