SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Putative DNA-binding domain
      Superfamily:
 Putative DNA-binding domain
        Family:
 Excisionase-like
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Putative DNA-binding domain
      Superfamily:
 Putative DNA-binding domain
        Family:
 Excisionase-like
protein domain  species  PDB ID  instances  bonded 
Excisionase Xis Bacteriophage lambda [TaxId: 10710] 1rh6 2 1
Excisionase Xis Bacteriophage lambda [TaxId: 10710] 2ief 3 3
Excisionase Xis Bacteriophage lambda [TaxId: 10710] 2og0 2 2
mu transposase, DNA-binding domain Bacteriophage mu [TaxId: 10677] 1g4d 1 1
Total: 4 8 7
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj S-Bb L-Bb L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: Excisionase-like [ a.6.1.7 ]
Analized complexes: 9
Complexes with DNA: 4
Conserved water: 39
Download:
Sequence alignment: a_6_1_7.fas ]
Sequence alignment with secondary structure: a_6_1_7_with_ss.fas ]
Superposition in PDB format: a.6.1.7.pdb ]
Alignment in MSF: a_6_1_7.msf ]
Image of alignment with secondary structure marked: a_6_1_7.PNG ]
Water clusters: a.6.1.7.flat.txt ]
a.6.1.7.pivot.txt ]
RasMol script: a.6.1.7.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1qpm A - - 1
ON
1g4d A - - 2
ON
1tns N/A - - 3
ON
1tnt N/A - - 4
ON
1rh6 A - - 5
ON
1rh6 B - - 6
ON
2og0 A 1 51 7
ON
2og0 B 1 52 8
ON
2ief A 1 55 9
ON
2ief B 1 54 10
ON
2ief C 1 53 11
ON
1pm6 A - - 12
ON
1lx8 A - - 13
ON
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