SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 C-terminal effector domain of the bipartite response regulators
        Family:
 PhoB-like
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 C-terminal effector domain of the bipartite response regulators
        Family:
 PhoB-like
protein domain  species  PDB ID  instances  bonded 
PhoB Escherichia coli [TaxId: 562] 1gxp 4 4
PhoB Escherichia coli [TaxId: 562] 2z33 1 1
Total: 2 5 5
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj S-Bb L-Bb L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: PhoB-like [ a.4.6.1 ]
Analized complexes: 12
Complexes with DNA: 1
Conserved water: 68
Download:
Sequence alignment: a_4_6_1.fas ]
Sequence alignment with secondary structure: a_4_6_1_with_ss.fas ]
Superposition in PDB format: a.4.6.1.pdb ]
Alignment in MSF: a_4_6_1.msf ]
Image of alignment with secondary structure marked: a_4_6_1.PNG ]
Water clusters: a.4.6.1.flat.txt ]
a.4.6.1.pivot.txt ]
RasMol script: a.4.6.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1opc N/A - - 1
ON
1odd N/A - - 2
ON
2jpb A 136 235 3
ON
1kgs A 124 225 4
ON
1gxq A - - 5
ON
1gxp A - - 6
ON
1gxp B - - 7
ON
1gxp E - - 8
ON
1gxp F - - 9
ON
1qqi A - - 10
ON
1p2f A 121 217 11
ON
2ff4 A 10 104 12
ON
2ff4 B 10 104 13
ON
2fez A 10 104 14
ON
1ys7 A 128 233 15
ON
1ys7 B 128 233 16
ON
1ys6 A 128 233 17
ON
1ys6 B 128 233 18
ON
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