SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 C-terminal effector domain of the bipartite response regulators
        Family:
 Spo0A
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 C-terminal effector domain of the bipartite response regulators
        Family:
 Spo0A
protein domain  species  PDB ID  instances  bonded 
Spo0A Bacillus subtilis [TaxId: 1423] 1lq1 4 4
Total: 1 4 4
    Extended information about type of interaction with DNA:
General
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: Spo0A [ a.4.6.3 ]
Analized complexes: 2
Complexes with DNA: 1
Conserved water: 57
Download:
Sequence alignment: a_4_6_3.fas ]
Sequence alignment with secondary structure: a_4_6_3_with_ss.fas ]
Superposition in PDB format: a.4.6.3.pdb ]
Alignment in MSF: a_4_6_3.msf ]
Image of alignment with secondary structure marked: a_4_6_3.PNG ]
Water clusters: a.4.6.3.flat.txt ]
a.4.6.3.pivot.txt ]
RasMol script: a.4.6.3.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1fc3 A - - 1
ON
1fc3 B - - 2
ON
1fc3 C - - 3
ON
1lq1 A - - 4
ON
1lq1 B - - 5
ON
1lq1 C - - 6
ON
1lq1 D - - 7
ON
© NPIDB team 2003 - 2017

text