SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Ribbon-helix-helix
      Superfamily:
 Ribbon-helix-helix
        Family:
 Arc/Mnt-like phage repressors
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 Ribbon-helix-helix
      Superfamily:
 Ribbon-helix-helix
        Family:
 Arc/Mnt-like phage repressors
protein domain  species  PDB ID  instances  bonded 
Arc repressor Salmonella bacteriophage P22 [TaxId: 10754] 1bdv 4 4
Arc repressor Salmonella bacteriophage P22 [TaxId: 10754] 1bdt 4 4
Arc repressor Salmonella bacteriophage P22 [TaxId: 10754] 1par 4 4
Total: 3 12 12
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj S-Bb S-Mj L-Bb L-Mj 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Arc/Mnt-like phage repressors [ a.43.1.1 ]
Analized complexes: 13
Complexes with DNA: 3
Conserved water: 54
Download:
Sequence alignment: a_43_1_1.fas ]
Sequence alignment with secondary structure: a_43_1_1_with_ss.fas ]
Superposition in PDB format: a.43.1.1.pdb ]
Alignment in MSF: a_43_1_1.msf ]
Image of alignment with secondary structure marked: a_43_1_1.PNG ]
Water clusters: a.43.1.1.flat.txt ]
a.43.1.1.pivot.txt ]
RasMol script: a.43.1.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1baz A - - 1
ON
1baz B - - 2
ON
1baz C - - 3
ON
1baz D - - 4
ON
1u9p A 72 107 5
ON
1myk A - - 6
ON
1myk B - - 7
ON
1myl A - - 8
ON
1myl B - - 9
ON
1myl C - - 10
ON
1myl D - - 11
ON
1myl E - - 12
ON
1myl F - - 13
ON
1bdt A - - 14
ON
1bdt B - - 15
ON
1bdt C - - 16
ON
1bdt D - - 17
ON
1par A - - 18
ON
1par B - - 19
ON
1par C - - 20
ON
1par D - - 21
ON
1bdv A - - 22
ON
1bdv B - - 23
ON
1bdv C - - 24
ON
1bdv D - - 25
ON
1qtg A - - 26
ON
1qtg B - - 27
ON
1arr A - - 28
ON
1arr B - - 29
ON
1arq A - - 30
ON
1arq B - - 31
ON
1b28 A - - 32
ON
1b28 B - - 33
ON
1nla A - - 34
ON
1nla B - - 35
ON
1mnt A - - 36
ON
1mnt B - - 37
ON
© NPIDB team 2003 - 2017

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