SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA-glycosylase
      Superfamily:
 DNA-glycosylase
        Family:
 Mismatch glycosylase
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA-glycosylase
      Superfamily:
 DNA-glycosylase
        Family:
 Mismatch glycosylase
protein domain  species  PDB ID  instances  bonded 
Catalytic domain of MutY Bacillus stearothermophilus [TaxId: 1422] 1rrq 1 1
Catalytic domain of MutY Bacillus stearothermophilus [TaxId: 1422] 1rrs 1 1
Catalytic domain of MutY Bacillus stearothermophilus [TaxId: 1422] 1vrl 1 1
Total: 3 3 3
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb L-Bb L-Mj L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: Mismatch glycosylase [ a.96.1.2 ]
Analized complexes: 18
Complexes with DNA: 3
Conserved water: 109
Download:
Sequence alignment: a_96_1_2.fas ]
Sequence alignment with secondary structure: a_96_1_2_with_ss.fas ]
Superposition in PDB format: a.96.1.2.pdb ]
Alignment in MSF: a_96_1_2.msf ]
Image of alignment with secondary structure marked: a_96_1_2.PNG ]
Water clusters: a.96.1.2.flat.txt ]
a.96.1.2.pivot.txt ]
RasMol script: a.96.1.2.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1mun N/A - - 1
ON
1kg2 A - - 2
ON
1kg5 A - - 3
ON
1muy A - - 4
ON
1kg6 A - - 5
ON
1kg7 A - - 6
ON
1wei A - - 7
ON
1kg4 A - - 8
ON
1kg3 A - - 9
ON
1kqj A - - 10
ON
1mud A - - 11
ON
1weg A - - 12
ON
1wef A - - 13
ON
1rrq A 9 229 14
ON
1rrs A 9 230 15
ON
1vrl A 9 230 16
ON
1ngn A - - 17
ON
1kea A - - 18
ON
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