SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 TrpR-like
        Family:
 Trp repressor, TrpR
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 DNA/RNA-binding 3-helical bundle
      Superfamily:
 TrpR-like
        Family:
 Trp repressor, TrpR
protein domain  species  PDB ID  instances  bonded 
Trp repressor, TrpR Escherichia coli [TaxId: 562] 1rcs 2 2
Trp repressor, TrpR Escherichia coli [TaxId: 562] 1co0 2 2
Trp repressor, TrpR Escherichia coli [TaxId: 562] 1tro 4 4
Trp repressor, TrpR Escherichia coli [TaxId: 562] 1trr 8 8
Total: 4 16 16
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj L-Bb L-Mj L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Trp repressor, TrpR [ a.4.12.1 ]
Analized complexes: 13
Complexes with DNA: 4
Conserved water: 145
Download:
Sequence alignment: a_4_12_1.fas ]
Sequence alignment with secondary structure: a_4_12_1_with_ss.fas ]
Superposition in PDB format: a.4.12.1.pdb ]
Alignment in MSF: a_4_12_1.msf ]
Image of alignment with secondary structure marked: a_4_12_1.PNG ]
Water clusters: a.4.12.1.flat.txt ]
a.4.12.1.pivot.txt ]
RasMol script: a.4.12.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1jhg A - - 1
ON
2oz9 R 5 105 2
ON
1p6z N - - 3
ON
1p6z R - - 4
ON
1zt9 A 5 105 5
ON
1zt9 B 5 105 6
ON
1zt9 D 5 105 7
ON
1zt9 E 5 105 8
ON
1tro A - - 9
ON
1tro C - - 10
ON
1tro E - - 11
ON
1tro G - - 12
ON
3wrp N/A - - 13
ON
1wrp R - - 14
ON
1trr A - - 15
ON
1trr B - - 16
ON
1trr D - - 17
ON
1trr E - - 18
ON
1trr G - - 19
ON
1trr H - - 20
ON
1trr J - - 21
ON
1trr K - - 22
ON
1mi7 R - - 23
ON
1rcs A - - 24
ON
1rcs B - - 25
ON
1wrt R - - 26
ON
1wrt S - - 27
ON
1wrs R - - 28
ON
1wrs S - - 29
ON
1co0 A - - 30
ON
1co0 B - - 31
ON
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