SCOP:
 All list
  Class:
 Alpha and beta proteins (a/b)
    Fold:
 Restriction endonuclease-like
      Superfamily:
 Restriction endonuclease-like
        Family:
 Restriction endonuclease PvuII
protein domain  species  PDB ID  instances  bonded 
Restriction endonuclease PvuII Proteus vulgaris [TaxId: 585] 3pvi 2 2
Restriction endonuclease PvuII Proteus vulgaris [TaxId: 585] 2pvi 2 2
Restriction endonuclease PvuII Proteus vulgaris [TaxId: 585] 1eyu 2 2
Restriction endonuclease PvuII Proteus vulgaris [TaxId: 585] 1f0o 2 2
Restriction endonuclease PvuII Proteus vulgaris [TaxId: 585] 1pvi 2 2
Total: 5 10 10
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb S-Bb L-Bb L-Mj L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Restriction endonuclease PvuII [ c.52.1.6 ]
Analized complexes: 9
Complexes with DNA: 5
Conserved water: 121
Download:
Sequence alignment: c_52_1_6.fas ]
Sequence alignment with secondary structure: c_52_1_6_with_ss.fas ]
Superposition in PDB format: c.52.1.6.pdb ]
Alignment in MSF: c_52_1_6.msf ]
Image of alignment with secondary structure marked: c_52_1_6.PNG ]
Water clusters: c.52.1.6.flat.txt ]
c.52.1.6.pivot.txt ]
RasMol script: c.52.1.6.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
3pvi A - - 1
ON
3pvi B - - 2
ON
2pvi A - - 3
ON
2pvi B - - 4
ON
1eyu A - - 5
ON
1eyu B - - 6
ON
1k0z A - - 7
ON
1k0z B - - 8
ON
1pvu A - - 9
ON
1pvu B - - 10
ON
1f0o A - - 11
ON
1f0o B - - 12
ON
1h56 A - - 13
ON
1h56 B - - 14
ON
1pvi A - - 15
ON
1pvi B - - 16
ON
1ni0 A - - 17
ON
1ni0 B - - 18
ON
1ni0 C - - 19
ON
© NPIDB team 2003 - 2019

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