SCOP:
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  Class:
 Small proteins
    Fold:
 Zn2/Cys6 DNA-binding domain
      Superfamily:
 Zn2/Cys6 DNA-binding domain
        Family:
 Zn2/Cys6 DNA-binding domain
SCOP:
 All list
  Class:
 Small proteins
    Fold:
 Zn2/Cys6 DNA-binding domain
      Superfamily:
 Zn2/Cys6 DNA-binding domain
        Family:
 Zn2/Cys6 DNA-binding domain
protein domain  species  PDB ID  instances  bonded 
Ethanol regulon transcriptional activator ALCR DNA-binding domain Emericella nidulans, also known as Aspergillus nidulans [TaxId: 162425] 1f4s 1 1
Ethanol regulon transcriptional activator ALCR DNA-binding domain Emericella nidulans, also known as Aspergillus nidulans [TaxId: 162425] 1f5e 1 1
Gal4 Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 1d66 2 2
Gal4 Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 3coq 2 2
Hap1 (Cyp1) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 1hwt 4 4
Hap1 (Cyp1) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 2hap 2 2
Hap1 (Cyp1) Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 1qp9 4 4
PPR1 Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 1pyi 2 2
PUT3 Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] 1zme 2 2
Total: 9 20 20
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb H-Mj L-Bb L-Mj 
Method of 3-D alignment: SSM
Quality of 3-D alignment: low
Analized family: Zn2/Cys6 DNA-binding domain [ g.38.1.1 ]
Analized complexes: 14
Complexes with DNA: 8
Conserved water: 30
Download:
Sequence alignment: g_38_1_1.fas ]
Sequence alignment with secondary structure: g_38_1_1_with_ss.fas ]
Superposition in PDB format: g.38.1.1.pdb ]
Alignment in MSF: g_38_1_1.msf ]
Image of alignment with secondary structure marked: g_38_1_1.PNG ]
Water clusters: g.38.1.1.flat.txt ]
g.38.1.1.pivot.txt ]
RasMol script: g.38.1.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1d66 A 8 48 1
ON
1d66 B 8 48 2
ON
1aw6 N/A - - 3
ON
1pyi A 30 71 4
ON
1pyi B 30 71 5
ON
1zme C 31 66 6
ON
1zme D 31 66 7
ON
1ajy A 30 66 8
ON
1ajy B 30 66 9
ON
1hwt C 59 97 10
ON
1hwt D 55 97 11
ON
1hwt G 59 97 12
ON
1hwt H 56 97 13
ON
2hap C 55 97 14
ON
2hap D 56 97 15
ON
1qp9 A 55 97 16
ON
1qp9 B 56 97 17
ON
1qp9 C 58 97 18
ON
1qp9 D 55 97 19
ON
1pyc N/A - - 20
ON
1cld N/A - - 21
ON
2alc A - - 22
ON
3alc A - - 23
ON
1f4s P - - 24
ON
1f5e P - - 25
ON
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