SCOP:
 All list
  Class:
 Alpha and beta proteins (a+b)
    Fold:
 Origin of replication-binding domain, RBD-like
      Superfamily:
 Origin of replication-binding domain, RBD-like
        Family:
 Replication initiation protein E1
protein domain  species  PDB ID  instances  bonded 
Replication initiation protein E1 Bovine papillomavirus [TaxId: 10571] 1ksx 8 8
Replication initiation protein E1 Bovine papillomavirus [TaxId: 10571] 1ksy 4 4
Total: 2 12 12
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb S-Bb L-Bb L-Mj 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Replication initiation protein E1 [ d.89.1.2 ]
Analized complexes: 4
Complexes with DNA: 2
Conserved water: 7
Download:
Sequence alignment: d_89_1_2.fas ]
Sequence alignment with secondary structure: d_89_1_2_with_ss.fas ]
Superposition in PDB format: d.89.1.2.pdb ]
Alignment in MSF: d_89_1_2.msf ]
Image of alignment with secondary structure marked: d_89_1_2.PNG ]
Water clusters: d.89.1.2.flat.txt ]
d.89.1.2.pivot.txt ]
RasMol script: d.89.1.2.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1f08 A - - 1
ON
1f08 B - - 2
ON
1ksy A - - 3
ON
1ksy B - - 4
ON
1ksy C - - 5
ON
1ksx A - - 6
ON
1ksx B - - 7
ON
1ksx E - - 8
ON
1ksx F - - 9
ON
1ksx I - - 10
ON
1ksx J - - 11
ON
1ksx M - - 12
ON
1ksx N - - 13
ON
1r9w A - - 14
ON
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