SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 S13-like H2TH domain
      Superfamily:
 S13-like H2TH domain
        Family:
 Middle domain of MutM-like DNA repair proteins
SCOP:
 All list
  Class:
 All alpha proteins
    Fold:
 S13-like H2TH domain
      Superfamily:
 S13-like H2TH domain
        Family:
 Middle domain of MutM-like DNA repair proteins
protein domain  species  PDB ID  instances  bonded 
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1l1z 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1r2z 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1l2b 1 1
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1pji 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1l2c 1 1
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1pjj 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1l2d 1 1
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1pm5 1 1
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1tdz 1 1
DNA repair protein MutM (Fpg) Escherichia coli [TaxId: 562] 1k82 4 4
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1xc8 1 1
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1kfv 2 2
DNA repair protein MutM (Fpg) Lactococcus lactis [TaxId: 1358] 1nnj 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 2f5q 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1l1t 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 1r2y 1 1
DNA repair protein MutM (Fpg) Bacillus stearothermophilus [TaxId: 1422] 2f5s 1 1
Endonuclease VIII Escherichia coli [TaxId: 562] 2ea0 1 1
Endonuclease VIII Escherichia coli [TaxId: 562] 2opf 1 1
Endonuclease VIII Escherichia coli [TaxId: 562] 2oq4 2 2
Endonuclease VIII Escherichia coli [TaxId: 562] 1k3w 1 1
Endonuclease VIII Escherichia coli [TaxId: 562] 1k3x 1 1
Total: 22 27 27
    Extended information about type of interaction with DNA:
General
Interaction class: Miscellaneous
Method of 3-D alignment: SSM
Quality of 3-D alignment: middle
Analized family: Middle domain of MutM-like DNA repair proteins [ a.156.1.2 ]
Analized complexes: 24
Complexes with DNA: 19
Conserved water: 117
Download:
Sequence alignment: a_156_1_2.fas ]
Sequence alignment with secondary structure: a_156_1_2_with_ss.fas ]
Superposition in PDB format: a.156.1.2.pdb ]
Alignment in MSF: a_156_1_2.msf ]
Image of alignment with secondary structure marked: a_156_1_2.PNG ]
Water clusters: a.156.1.2.flat.txt ]
a.156.1.2.pivot.txt ]
RasMol script: a.156.1.2.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1ee8 A 122 210 1
ON
1ee8 B 122 210 2
ON
1r2z A 135 228 3
ON
1l1z A 135 222 4
ON
1l1t A 135 220 5
ON
1l2d A 135 220 6
ON
1l2c A 135 220 7
ON
1r2y A 135 228 8
ON
2f5q A 135 228 9
ON
1l2b A 135 223 10
ON
2f5s A 135 228 11
ON
1k82 A 129 216 12
ON
1k82 B 129 216 13
ON
1k82 C 129 216 14
ON
1k82 D 129 216 15
ON
1tdz A 132 219 16
ON
1pjj A 132 223 17
ON
1xc8 A 132 222 18
ON
1pji A 132 218 19
ON
1pm5 A 132 222 20
ON
1nnj A 132 219 21
ON
1kfv A 132 219 22
ON
1kfv B 132 217 23
ON
1k3x A 125 213 24
ON
1k3w A 125 214 25
ON
1q3b A 125 213 26
ON
1q3c A 125 213 27
ON
1q39 A 125 213 28
ON
1tdh A 132 246 29
ON
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