SCOP:
 All list
  Class:
 Alpha and beta proteins (a+b)
    Fold:
 Replication modulator SeqA, C-terminal DNA-binding domain
      Superfamily:
 Replication modulator SeqA, C-terminal DNA-binding domain
        Family:
 Replication modulator SeqA, C-terminal DNA-binding domain
protein domain  species  PDB ID  instances  bonded 
Replication modulator SeqA, C-terminal DNA-binding domain Escherichia coli [TaxId: 562] 1lrr 2 2
Replication modulator SeqA, C-terminal DNA-binding domain Escherichia coli [TaxId: 562] 1iu3 2 2
Replication modulator SeqA, C-terminal DNA-binding domain Escherichia coli [TaxId: 562] 1j3e 1 1
Total: 3 5 5
    Extended information about type of interaction with DNA:
General
Interaction class:  H-Bb S-Bb L-Bb L-Mj L-Mn 
Method of 3-D alignment: SSM
Quality of 3-D alignment: high
Analized family: Replication modulator SeqA, C-terminal DNA-binding domain [ d.228.1.1 ]
Analized complexes: 3
Complexes with DNA: 3
Conserved water: 11
Download:
Sequence alignment: d_228_1_1.fas ]
Sequence alignment with secondary structure: d_228_1_1_with_ss.fas ]
Superposition in PDB format: d.228.1.1.pdb ]
Alignment in MSF: d_228_1_1.msf ]
Image of alignment with secondary structure marked: d_228_1_1.PNG ]
Water clusters: d.228.1.1.flat.txt ]
d.228.1.1.pivot.txt ]
RasMol script: d.228.1.1.spt ]
Jmol visualisation of conserved water
PDB ID Chain Start residue End residue Model number Show
1j3e A - - 1
ON
1lrr A - - 2
ON
1lrr D - - 3
ON
1iu3 C - - 4
ON
1iu3 F - - 5
ON
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