General information
PDB ID 1AWC
Title MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
PDB header TRANSCRIPTION/DNA
Date 1997-10-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.15
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1awc.pdb AB DE 0
Biounits:
1awc.pdb1.pdb AB DE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain Q00422_321-400 1.9e-33 1 CL0123 A 321 400 DE  H-Bb H-Mj S-Bb L-Bb 
Ank_2 Repeat Q00420_10-101 7.8e-17 1 CL0465 B 10 101   
Ank_4 Repeat Q00420_104-157 5.9e-09 1 CL0465 B 104 157   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
GA binding protein (GABP) alpha A N/A N/A DE  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: beta-hairpin-alpha-hairpin repeat
    Superfamily: Ankyrin repeat
      Family: Ankyrin repeat
GA bindinig protein (GABP) beta 1 B N/A N/A -
GO terms
Protein chains: GO type: GO description:
A=320-429 C host cell nucleus
A=320-429 C nuclear chromatin
A=320-429 C nucleoplasm
A=320-429 C nucleus
A=320-429 F activating transcription factor binding
A=320-429 F chromatin binding
A=320-429 F DNA-binding transcription activator activity, RNA polymerase II-specific
A=320-429 F DNA-binding transcription factor activity, RNA polymerase II-specific
A=320-429 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A=320-429 F sequence-specific double-stranded DNA binding
A=320-429 F transcription regulatory region sequence-specific DNA binding
A=320-429 P blastocyst formation
A=320-429 P cell differentiation
A=320-429 P cellular response to dopamine
A=320-429 P in utero embryonic development
A=320-429 P negative regulation of megakaryocyte differentiation
A=320-429 P negative regulation of transcription by RNA polymerase II
A=320-429 P positive regulation of gene expression
A=320-429 P positive regulation of transcription by RNA polymerase II
A=320-429 P regulation of transcription by RNA polymerase II
B=5-157 C cytoplasmic ribonucleoprotein granule
B=5-157 C nucleoplasm
B=5-157 C nucleus
B=5-157 F transcription regulatory region sequence-specific DNA binding
B=5-157 P mitochondrion organization
B=5-157 P positive regulation of transcription by RNA polymerase II
Sequences
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1awc.pdb1.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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A (protein): 
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B (protein): 
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